Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2793 ATGGAACCCTCTTCCAATCATGCCATTCCTCACCCTTCTTCACATCCACTCTTGTCCTTCAGAGGGACACCACTTCACATGGATGCCCTCGATTTCTTCCCTCAGAAGACCAAAGAGATTCAAGACCATGATCACACTCATCACCATCAAACACTCCACTATCATGTAGATACCAGTTTGGATCTGCTTACAAAGAATACCGGTGGGAATAGATCAATGGAGGAAAATGAGGCATTGGAAACTGTGGATGAAAAGAGCAGGTTTGTAGCTATGGTAAGTGAATTGCACCAAATGAATGCTGAAAACCAAAGATTAAGAGAGTTGGTCGATGAGATGAACAATAACTGCAATGCCCTACGCATGCAACTTATCAACATAACGCAGAAGCAGCATAACCAAGGGAACAATGGAGTGAGTGGAGAGAAAGAAGAGATGGTTCCAAGGCCATTTTTAGAGATGGGTGTGAGTGAAAAGGAGGAGCAACCCTCAGAGGAAAAAGTGAAAGTTGATTTGATGCATCAGTGTAAGGGTAGTGATCAGAAAGAGATTGAAGATAAGTTGGATTGTGGAAGGGAAAGCTCAAAAGCTAGAATGGAAGCTGACCAACAACTTTCTACCAAACTTTCTAAATTGGATCAAAATTCAGAAACCTTGTCCATGATCAAGAAAGCTCGTGTGTCAGTTCGAGCAAGATCAGACTCCACAATGATTGCAGATGGATGCCAATGGCGAAAGTATGGACAGAAGATGGCAAAAGGGAATCCATGTCCAAGGGCTTATTATCGTTGCACAATGAGCAGTGCTTGTCCAGTGCGTAAACAAGTACAAAGGTGTGCAGAAGATCGAAGTGTGGTGATCACAACATATGAAGGACAGCACAACCATGCACTCCCTCCCACAGCTCAGGCAATGGCTGCCACCACATCTGCAGCTGCTTCAATGCTTCTTTCTGGATCAATGCCAAGCTCAGATGGCCAAATCAACCCAACCATGTTACAAAGTGCTTCACTTCCCTGCTCTCAGAACATGGCAACTCTCTCTGCCTCAGCCCCATTTCCCACCATCACTCTTGATCTCACTCAAAATCCTACCAACCAACTTGGCCTCCTCTCACCCCTTTTGGCTCGCAAGTTCATGTCAGTTCCAAAAATATTTGGACACTCACTGTGTGATCAAACTAAGCTTGCTGGCTTGCATGAGTCTCAGGGAAGGGACTCATCTCCATCATTTGCTAACTCATTCAATGCAGCTACTGCTGCTATCACAGCAGACCCCAATTTCACTGCAGCTCTTGTTGCTGCTATAACATCAGTCATGGGGAATTCACATAATAATTCAACTGGGGAAGAACATTGCAATAATAATGCATAG 1371 0.4442 MEPSSNHAIPHPSSHPLLSFRGTPLHMDALDFFPQKTKEIQDHDHTHHHQTLHYHVDTSLDLLTKNTGGNRSMEENEALETVDEKSRFVAMVSELHQMNAENQRLRELVDEMNNNCNALRMQLINITQKQHNQGNNGVSGEKEEMVPRPFLEMGVSEKEEQPSEEKVKVDLMHQCKGSDQKEIEDKLDCGRESSKARMEADQQLSTKLSKLDQNSETLSMIKKARVSVRARSDSTMIADGCQWRKYGQKMAKGNPCPRAYYRCTMSSACPVRKQVQRCAEDRSVVITTYEGQHNHALPPTAQAMAATTSAAASMLLSGSMPSSDGQINPTMLQSASLPCSQNMATLSASAPFPTITLDLTQNPTNQLGLLSPLLARKFMSVPKIFGHSLCDQTKLAGLHESQGRDSSPSFANSFNAATAAITADPNFTAALVAAITSVMGNSHNNSTGEEHCNNNA* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2793 456 Pfam WRKY DNA -binding domain 239 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g2793 456 SUPERFAMILY WRKY DNA-binding domain 230 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g2793 456 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 33 447 IPR044810 GO:0003700
Pvu8g2793 456 SMART WRKY_cls 237 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g2793 456 MobiDBLite consensus disorder prediction 1 20 - -
Pvu8g2793 456 ProSiteProfiles WRKY domain profile. 232 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g2793 456 Coils Coil 95 129 - -
Pvu8g2793 456 Gene3D WRKY domain 222 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g2793 456 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 33 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2793 Pvu-Chr8 58044223 58046591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2793 30 448 WRKY Transcription Factor Family AT1G62300 44.231 3.71e-98 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu8g2793 WRKY 9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2793 - - gsj:114372133 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0349 6 13591878 13594483 Pvu8g2793 8 58044223 58046591 PCT
Pvu6g0493 6 16091296 16095072 Pvu8g2793 8 58044223 58046591 PCT