Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu8g2792 | ATGGTTGAAGCCGTGGAAATCGAAGAAAGGCCAAAATTCAGAGATATTAGACGTTATTTCTGCCAGTACTGCGGTATCTGCAGATCCAAAAAAACCCTAATTACCTCTCACATCAATTCGCACCACAAGGAAGAGGATGAGAAGGCAAGAAAAGAAAGAGATCCTGAAGAAGAGTCTTCGAAATCCCACACCTGCGAGGACTGTGGCATCACTTTCAAGAAACACGCATATTTGTTGCAGCACATGCAAAGTCATTCGCTTGAGAGGCCGTTTGTGTGTGCGCTTGATGATTGTCAAGCGAGTTACAGAAGGAAGGACCACCTGACTAGGCACCTTCTACTACATGAAGGGAAGACTTTCAAGTGTCCTGTTGTGAATTGCAACACTGAGTTCTCTTTGCTGAGCAATATGAAAAGACACGTTGAGGAGATTCACGATGACAGTTCTCCTGCAGTTACTGACAAAAGTCACAAACAACATGTGTGTCCAGAGATTGGCTGTGGAAAGGTTTTCAGATTTGCTTCACAGCTAAAAAAGCATGAAGATTCTCATGTTAAGCTGGAGTCAGTGGATGTGGTGTGCTTAGAGCCTGGTTGCATGATGCATTTTACTAATGTCCAGTGCCTTAAAGCCCATGTAAATTCCTCTCATCAATATATGACCTGTGACATCTGTGGGTCTAAGCAACTGAAGAAGAATATTAAGCGTCACCTTCGTTCACATGAACCTGACAGCAGTTCCTTAGAGACCTTTCAATGCGAGTTTAAGGGTTGTAGCTGCACATTCTCTAATAAATCTAATCTTGACAAGCATAAGAAGGTCGTGCACCTTAAAGAAAAACCTTTTCTGTGTGGGTTTCCTGATTGTGGCATGAGATTTGCTTACAAACATGTGCGGGATAAACACGAAAAAACCGTTAAACATGTTTTTACCCTTGGTGATTTTGAAGAAGCTGATGAAGAGTTCAGGTCAAGGCCGAGGGGAGGGAGGAAGAGAAAATGTCCTACCGTTGAAATGTTAATCAGGAAGAGGGTTACCCCACCTAGTCAATGGGAGGATTGGTTATTTATGCAGGATAGTGAGTAG | 1086 | 0.4291 | MVEAVEIEERPKFRDIRRYFCQYCGICRSKKTLITSHINSHHKEEDEKARKERDPEEESSKSHTCEDCGITFKKHAYLLQHMQSHSLERPFVCALDDCQASYRRKDHLTRHLLLHEGKTFKCPVVNCNTEFSLLSNMKRHVEEIHDDSSPAVTDKSHKQHVCPEIGCGKVFRFASQLKKHEDSHVKLESVDVVCLEPGCMMHFTNVQCLKAHVNSSHQYMTCDICGSKQLKKNIKRHLRSHEPDSSSLETFQCEFKGCSCTFSNKSNLDKHKKVVHLKEKPFLCGFPDCGMRFAYKHVRDKHEKTVKHVFTLGDFEEADEEFRSRPRGGRKRKCPTVEMLIRKRVTPPSQWEDWLFMQDSE* | 362 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu8g2792 | 361 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 65 | 85 | IPR013087 | - | |
Pvu8g2792 | 361 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 162 | 184 | IPR013087 | - | |
Pvu8g2792 | 361 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 120 | 150 | IPR013087 | - | |
Pvu8g2792 | 361 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 63 | 90 | IPR013087 | - | |
Pvu8g2792 | 361 | PANTHER | - | 9 | 349 | - | - | |
Pvu8g2792 | 361 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 251 | 281 | IPR013087 | - | |
Pvu8g2792 | 361 | MobiDBLite | consensus disorder prediction | 38 | 63 | - | - | |
Pvu8g2792 | 361 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 122 | 145 | IPR013087 | - | |
Pvu8g2792 | 361 | SUPERFAMILY | beta-beta-alpha zinc fingers | 118 | 146 | IPR036236 | - | |
Pvu8g2792 | 361 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 91 | 120 | IPR013087 | - | |
Pvu8g2792 | 361 | SMART | c2h2final6 | 63 | 85 | IPR013087 | - | |
Pvu8g2792 | 361 | SMART | c2h2final6 | 91 | 115 | IPR013087 | - | |
Pvu8g2792 | 361 | SMART | c2h2final6 | 282 | 308 | IPR013087 | - | |
Pvu8g2792 | 361 | SMART | c2h2final6 | 120 | 145 | IPR013087 | - | |
Pvu8g2792 | 361 | SMART | c2h2final6 | 251 | 276 | IPR013087 | - | |
Pvu8g2792 | 361 | SMART | c2h2final6 | 19 | 41 | IPR013087 | - | |
Pvu8g2792 | 361 | SMART | c2h2final6 | 160 | 184 | IPR013087 | - | |
Pvu8g2792 | 361 | SMART | c2h2final6 | 192 | 217 | IPR013087 | - | |
Pvu8g2792 | 361 | SMART | c2h2final6 | 220 | 241 | IPR013087 | - | |
Pvu8g2792 | 361 | Gene3D | Classic Zinc Finger | 158 | 242 | - | - | |
Pvu8g2792 | 361 | Gene3D | Classic Zinc Finger | 247 | 325 | - | - | |
Pvu8g2792 | 361 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 160 | 189 | IPR013087 | - | |
Pvu8g2792 | 361 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 93 | 115 | IPR013087 | - | |
Pvu8g2792 | 361 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 253 | 276 | IPR013087 | - | |
Pvu8g2792 | 361 | Gene3D | Classic Zinc Finger | 6 | 91 | - | - | |
Pvu8g2792 | 361 | Gene3D | Classic Zinc Finger | 92 | 116 | - | - | |
Pvu8g2792 | 361 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 19 | 46 | IPR013087 | - | |
Pvu8g2792 | 361 | PANTHER | ZINC FINGER PROTEIN | 9 | 349 | - | - | |
Pvu8g2792 | 361 | SUPERFAMILY | beta-beta-alpha zinc fingers | 71 | 124 | IPR036236 | - | |
Pvu8g2792 | 361 | Pfam | Zinc finger, C2H2 type | 91 | 115 | IPR013087 | - | |
Pvu8g2792 | 361 | Pfam | Zinc finger, C2H2 type | 160 | 184 | IPR013087 | - | |
Pvu8g2792 | 361 | Pfam | Zinc finger, C2H2 type | 63 | 85 | IPR013087 | - | |
Pvu8g2792 | 361 | Pfam | Zinc finger, C2H2 type | 251 | 276 | IPR013087 | - | |
Pvu8g2792 | 361 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 284 | 308 | IPR013087 | - | |
Pvu8g2792 | 361 | SUPERFAMILY | beta-beta-alpha zinc fingers | 233 | 290 | IPR036236 | - | |
Pvu8g2792 | 361 | Gene3D | Classic Zinc Finger | 117 | 157 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu8g2792 | Pvu-Chr8 | 58040008 | 58042397 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu8g2792 | 87 | 311 | C2H2 Transcription Factor Family | AT1G72050 | 50.903 | 3.34e-90 | 272 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Pvu8g2792 | zf-C2H2 | 0.01 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu8g2792 | K09191 | - | gmx:100801812 | 660.218 |