Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2787 ATGGCGAATTTGCCGCAATCAATCTCAATGAGTGGTGGGTCCTTTGGAGCTCCTTCTGTCTCTGCAACAAAGGATCGTAGAATGGCGTCTGTCGAACATCTCGTCCTCGAACTCAGCAACCCTGATCTTCGAGAAAACGCACTTCATGAACTCTCCAAGAAGAGAGAGTTATTTCAGGATCTCGCTCCGTTGTTGTGGAATTCTTTTGGTACTATGGCGGCACTTTTGCAGGAAATAGTTTCAATATACCCTGTTATTTCACCACCAAACCTCACTCCAGCACAATCAAATCGAGTCTGCAATGCTCTTGCTCTTCTTCAGTGTGTGGCGTCTCACCTTGATACAAGGATGCAATTCCTAAATGCTCATATACCTCTATATCTGTATCCCTTCCTTAATACAACAAGTAAGTCGAGGCCATTTGAGTATTTGAGACTTACCAGTCTAGGAGTCATTGGTGCCTTGGTGAAGGTTGACGATACAGAAGTTATAAGTTTTCTTCTTTCAACAGAGATTATTCCGCTGTGCTTGCGCAGTATGGAAATGGGCAGTGAATTGTCAAAAACGGTTGCAACCTTTATAGTTCAAAAAATTCTGTTGGACGAAATTGGTTTGAAATATATTTGCACTACAGCAGAGCGTTTTTATGCAGTGGGTCGAGTTTTGGGAAACATGGTGGCAACTCTTGTAGAGCAACCATCATGCCGTCTTTTGAAGCATATTATTCGTTGTTATCTTCGTCTGTCAGATAACCAGAGTGCTTGCGAGGCCTTGAGAACCTGTCTCCCAGACATGTTAAGAGACGCTACATTCAGTAGTTGCCTTCGTGAAGACCCAACAGCAAGGAGGTGGCTACAGCAGTTGCTTCACAATATCGGAGTCAATCGAGTTCCTGCACTTCAAGGTGGAGGAGGATTTGATCACATGATGGTGTCGTGA 939 0.4398 MANLPQSISMSGGSFGAPSVSATKDRRMASVEHLVLELSNPDLRENALHELSKKRELFQDLAPLLWNSFGTMAALLQEIVSIYPVISPPNLTPAQSNRVCNALALLQCVASHLDTRMQFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRSMEMGSELSKTVATFIVQKILLDEIGLKYICTTAERFYAVGRVLGNMVATLVEQPSCRLLKHIIRCYLRLSDNQSACEALRTCLPDMLRDATFSSCLREDPTARRWLQQLLHNIGVNRVPALQGGGGFDHMMVS* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2787 312 SUPERFAMILY ARM repeat 36 273 IPR016024 -
Pvu8g2787 312 PANTHER BNAA05G20110D PROTEIN 1 310 - -
Pvu8g2787 312 Gene3D - 23 293 IPR011989 -
Pvu8g2787 312 PANTHER UNCHARACTERIZED 1 310 - -
Pvu8g2787 312 Pfam Cell differentiation family, Rcd1-like 34 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2787 Pvu-Chr8 57996507 58001562 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Pvu8g2787 Rcd1 2e-128 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2787 K12606 - gmx:100801266 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0489 6 16037262 16045805 Pvu8g2787 8 57996507 58001562 PCT