Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2773 ATGATATCTGGTAGGTGTGCAGCTTGCAAGAATCAAAGAAGAAGATGCCCTTCAGATTGCATTTTCTCTCCACATTTCCCTGCTAATGATCCTCAAAGATTTGCTTCTGTTCATAAAATCTATGGTGGCAGCAATGTTGGAAAAATGCTTCAGCAAATTCCACCTTATTTACGTGAACAAACTGCAAATTCTTTGTACTTTGAAGCACAATGTAGGATTCAAGACCCAGTTTATGGATGTGTTGGGATTATCTCAAAATTATATGAAGAAATCCGTAATACAGAGACTGAACTTGCCCAGATTCAGACACAGATTACCTGTCACAAGCTTAAAGTGGTGCAGGCAAATAACAATGCTGAAACAAACATGAACTTGTTATCAACAGTTGGAACTGGAACCAATTTTCAAATACCTGCACCAAGCACCAATCCTACAGAGTTTCAATGGCCAAATCAAGTTCCTTGGTTTCATTAA 474 0.3819 MISGRCAACKNQRRRCPSDCIFSPHFPANDPQRFASVHKIYGGSNVGKMLQQIPPYLREQTANSLYFEAQCRIQDPVYGCVGIISKLYEEIRNTETELAQIQTQITCHKLKVVQANNNAETNMNLLSTVGTGTNFQIPAPSTNPTEFQWPNQVPWFH* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2773 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 118 - -
Pvu8g2773 157 Coils Coil 84 104 - -
Pvu8g2773 157 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Pvu8g2773 157 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Pvu8g2773 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2773 Pvu-Chr8 57893659 57894482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2773 1 118 AS2 family AT3G26660 56.780 1.06e-46 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pvu8g2773 LOB 1.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2773 - - ccaj:109810657 232.261