Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2755 ATGCCCACTTCTCTCACTGTCACCAACTGGTTTTCTGAAATGGTAGAAACAGTAGCTGCAAGGTTTAAGCAGCTTTGCAGTGGCGGTTCTGTAGTTGGGCTATTCATGAAGGTTGTTGAGAGAGTTGTTTTTGCTTTATTTACTTGCATTCTGGCACTTGGTGGGTCAATAGTCGGAACAATTGCAGGAGGCATAAAGGGGCAGACCACAGAAACTGGTTTTCTTGATGGGGCTGGCAAAGGAGCAATCACAGGAGCCATTGCAGCATTGGAATTGATCAATTTTGATGCTGTTGATGAGCCATTGTCCAAGTTTGCCCTGTTGAGAAGTTTGTTAAATGGGAAAGTCTTTATGGAATGGATATGTCCAGCTGTGGCAAAACTCTATCAGTTGCATGTTACAATCAACACACTGGAAACAATTTACCAAGAAGTATCAGACATTTATGATACCAGGGGAGTTAGAGGGGTACCCCAGAATGTAATTATGAAGCTTCCTTTTCAGCCATTCAACTCTAGCAAAATCTCAAAATTACACAACATGTCTTGCTGCTCAATTTGCTTCCAGGATTTTGAGGATGGAGAATTGGTGAGGGTACTTCCAAAATGTGGCCACCTATTTCACCTAGAATGCATAGACAAATGGCTAGTCCAACAAGGATCATGCCCAATGTGCAGAACTTATGTTCCAGACCACATTCTTAAATAA 708 0.4209 MPTSLTVTNWFSEMVETVAARFKQLCSGGSVVGLFMKVVERVVFALFTCILALGGSIVGTIAGGIKGQTTETGFLDGAGKGAITGAIAALELINFDAVDEPLSKFALLRSLLNGKVFMEWICPAVAKLYQLHVTINTLETIYQEVSDIYDTRGVRGVPQNVIMKLPFQPFNSSKISKLHNMSCCSICFQDFEDGELVRVLPKCGHLFHLECIDKWLVQQGSCPMCRTYVPDHILK* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2755 235 SMART ring_2 184 225 IPR001841 -
Pvu8g2755 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 146 232 IPR013083 -
Pvu8g2755 235 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 15 229 IPR044523 -
Pvu8g2755 235 SUPERFAMILY RING/U-box 183 230 - -
Pvu8g2755 235 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 15 229 - -
Pvu8g2755 235 CDD RING-H2_PA-TM-RING 183 226 - -
Pvu8g2755 235 Pfam Ring finger domain 184 226 IPR001841 -
Pvu8g2755 235 ProSiteProfiles Zinc finger RING-type profile. 184 226 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2755 Pvu-Chr8 57781619 57783143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2755 45 229 C3H Transcription Factor Family AT5G66070 36.598 4.50e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2755 - K19041 gmx:100305612 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0455 6 15683968 15686456 Pvu8g2755 8 57781619 57783143 PCT