Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2746 ATGAGTTTCTTTTCATGTTGCAAATCATCAGAGAAGATCAACAAGAACTCATTCAGAAGGAGCAGCAAGGACTTCAATTATGAAAAAGCTATGCCATCATGTGGCCGCTTGTGTTTTAAACCTGATAACAGCAAGAGGAAATACATAGAACAAGAAATAGCAAAGATTGGAAAAGGGAATATTACCTCGCAGACTTTTTCTTATTACGAGCTATGTATTGCAACTCGGCACTTTAACTCTGACAACATGATTGGTGAAGGAGGCTTTGGAAGGGTATACAAAGGACGCATTAAAAGCATACATCAGGTTGTTGCTGTGAAGAAACTTAACAGGAATGGATTCCAAGGAAACAGGGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTCTTGCACCACCCTAACCTTGTCAATTTGGTAGGGTATTGTGCAGATGGTGAACAAAGGATTTTGGTATACGAGTACATGGTGAATGGTTCTTTAGAAGATCACCTTCTTGAACTACCTGCGAACAAAAAGGCTTTGGATTGGCATACCAGAATGAACATTGCAGCAGGTGCAGCTAAAGGACTTGAATACTTGCATGAGGTAGCAAATCCACCAGTGATATACCGTGATTTCAAATCATCAAACATACTATTAGATGAAAACTTCAATCCAAAGCTCTCTGATTTTGGACTAGCAAAGCTTGGTCCAACTGGTGATAAAACTCATGTATCCACCAGGGTGATGGGAACTTATGGCTATTGTGCACCTGAGTATGCCTCCACAGGTCAATTGACTACAAAATCTGATATATACAGCTTTGGAGTAGTATTTCTAGAGATGATCACAGGAAGAAGAGTAATTGATCAGTCAAGACCATCTCTAGAGCAAAACTTAGTCACTTGGGCACAACCACTGTTCAAAGACAGAAGGAAATTTGCATTAATGGCTGATCCATTGCTAAAAGGTAACTACCCTGCAAAGGGTCTACACCAAGCACTAGCAGTTGCAGCAATGTGTCTTCAGGAGGAAGCAAATACCAGACCTTTGATTAGTGATGTGGTTACAGCTCTTGATGTTTTAGCAAAGACGCAGGTGCAAGTGGGAAAACAGCAACGCACAGCAGAGGCTTTTATGGAGGACAAAGAATGCAGTTGA 1140 0.4061 MSFFSCCKSSEKINKNSFRRSSKDFNYEKAMPSCGRLCFKPDNSKRKYIEQEIAKIGKGNITSQTFSYYELCIATRHFNSDNMIGEGGFGRVYKGRIKSIHQVVAVKKLNRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCADGEQRILVYEYMVNGSLEDHLLELPANKKALDWHTRMNIAAGAAKGLEYLHEVANPPVIYRDFKSSNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTKSDIYSFGVVFLEMITGRRVIDQSRPSLEQNLVTWAQPLFKDRRKFALMADPLLKGNYPAKGLHQALAVAAMCLQEEANTRPLISDVVTALDVLAKTQVQVGKQQRTAEAFMEDKECS* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2746 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Pvu8g2746 379 Pfam Protein kinase domain 79 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2746 379 SUPERFAMILY Protein kinase-like (PK-like) 61 352 IPR011009 -
Pvu8g2746 379 Gene3D Transferase(Phosphotransferase) domain 1 155 378 - -
Pvu8g2746 379 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2746 379 CDD STKc_IRAK 84 353 - -
Pvu8g2746 379 Gene3D Phosphorylase Kinase; domain 1 49 154 - -
Pvu8g2746 379 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 379 - -
Pvu8g2746 379 ProSitePatterns Protein kinases ATP-binding region signature. 84 108 IPR017441 GO:0005524
Pvu8g2746 379 PANTHER OS07G0668900 PROTEIN 1 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2746 Pvu-Chr8 57704635 57707947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2746 1 356 Glycoside Hydrolase AT3G07070 61.918 2.02e-158 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pvu8g2746 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2746 - - gmx:100798032 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0414 6 14941940 14945392 Pvu8g2746 8 57704635 57707947 PCT