Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2735 ATGGGGAAAAATGAGTTTCTCACACCAAAAGCAATTGCCAATCGAATCAAAGCAAAAGGATTGCAGAAGCTTCGGTGGTATTGCCAGATGTGCCAGAAGCAGTGCCGAGATGAGAATGGATTTAAATGCCATTGCATGGGTGAAGGGCACCAGCGTCAAATGCAGATTTTTGGACAAAACCCACACCGGATAGTTGAGGGCTATTCTGAAGAGTTTGAGAGCTCTTTTCTGGAGCACATGAAGCGCAGCCACCGATTCAGCCGTGTGGCAGCCACTGTAGTTTACAACGAATACATAAATGATAGACACCATGTTCATATGAACTCCACTCAGTGGGCAACACTCACTGAATTTGTCAAGTACTTGGGTCGAACTGGCAAATGTAAGGTGGAGGAAACACCCAAGGGATGGTTCATTACATACATAGACAGAGATTCAGAAACCCTTTTCAAGGAGAGGATGAAGAATAAGAGAATCAAGGCAGATATGGTAGATGAAGAAAAGCAAGAGAAGGAGATCAGGAAACAGATTGAAATGGCTGAACAAATGATGCAGCAGCCTACTCCTGAGGCTGATCAGCCTTTACAATCTGAGCCTCCAAGAGAACTAAATATGGAAGATGGAATTAAGATAGGGTTTTCTCTTGGGTCTTCATTTGCTAAACCACCTGTGACCAAGGAAGCATCAAGGGTGGTGTTTGAGGAGGCTGATGAAGAGAGATATGGGGAACGAAACCCTGGAAACAATTTGAAGAGGAAAGAAAGGGATGGTGGAAAATCAACTTTGGATGAAATGATGAGGGATGAAGAGAAGAAAAAGGAAAAAATCAACAGGAAGGATTACTGGTTGCATGAGGGAATTGTTGTTAAGGTCATGAGCAAAGTTTTGGCAGAGAAGGGCTACTACAAGCAAAAGGGTGTTGTGCGGAAGGTGATTGACAAGTATGTTGGGGAAATAGAAATTCTTGAAAGTAAGCACGTGCTCAGAGTTGATCAGGCAGAGCTTGAAACTGTGATTCCACAAGTTGGGGGTCGTGTAAAAATTGTCAACGGTGCATATAGAGGATCCATTGCTAAGCTGTTAGGGGTGGATACAGATAATTTTTGTGCTAAGGTGCAGATCGAGAAAGGACCCTATGATGGCAGAATACTTAAAGCTATGGAATACGAAGACATTTGTAAAGTAGCCTAG 1191 0.4316 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMGEGHQRQMQIFGQNPHRIVEGYSEEFESSFLEHMKRSHRFSRVAATVVYNEYINDRHHVHMNSTQWATLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRIKADMVDEEKQEKEIRKQIEMAEQMMQQPTPEADQPLQSEPPRELNMEDGIKIGFSLGSSFAKPPVTKEASRVVFEEADEERYGERNPGNNLKRKERDGGKSTLDEMMRDEEKKKEKINRKDYWLHEGIVVKVMSKVLAEKGYYKQKGVVRKVIDKYVGEIEILESKHVLRVDQAELETVIPQVGGRVKIVNGAYRGSIAKLLGVDTDNFCAKVQIEKGPYDGRILKAMEYEDICKVA* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2735 396 CDD KOW_KIN17 342 395 IPR041995 -
Pvu8g2735 396 Gene3D - 60 160 IPR038254 -
Pvu8g2735 396 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 396 IPR037321 -
Pvu8g2735 396 Gene3D - 286 339 - -
Pvu8g2735 396 Coils Coil 259 279 - -
Pvu8g2735 396 Gene3D - 340 396 IPR014722 -
Pvu8g2735 396 MobiDBLite consensus disorder prediction 235 271 - -
Pvu8g2735 396 Pfam KN17 SH3-like C-terminal domain 278 331 IPR041330 -
Pvu8g2735 396 PANTHER BNAA05G13760D PROTEIN 1 396 - -
Pvu8g2735 396 Coils Coil 156 186 - -
Pvu8g2735 396 SMART Kin17_mid_2 52 178 IPR019447 -
Pvu8g2735 396 Pfam Domain of Kin17 curved DNA-binding protein 52 177 IPR019447 -
Pvu8g2735 396 SUPERFAMILY beta-beta-alpha zinc fingers 26 66 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2735 Pvu-Chr8 57641586 57644045 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2735 1 396 C2H2 Transcription Factor Family AT1G55460 68.357 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2735 K13102 - gmx:100785931 735.717