Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2733 ATGGTTCAACCAAGTAATGTGACTCCCCTATCATCCACCCCACTTTCTTCCTCTGATGACAACACCTTCAATGATGCTATTGATTCTTCCTCTCATTCAAAATCATCATCATCATCATCAAAGAGAACACGCGGTAGGCCTGCAGGCTCCAAGAACAAACAAAAATTAACCTTTGTGATTAACCGAAGCAGTGAGCATGTCGAAAAACCTATACTCATTCAAATTCCTAGAAACTCTGATGTAATTGAGACACTAACCCAATTCGCCCGTGATTACCAAACTAGCATCACAGTGCAAACCGCATCAGGATCTATCCTAAACGCCACTCTCCGCGATGACAGTGAATATGAAATTTCTACTTTCATTGTTCATGGACCCTTTACTTTAGTTTCCCTCAGTGGCACTTGCATAAATAACAACTCTAGTACTACATTATCATCTAATTTTGACTGTTTTTTTAACATTTGTTTTTGTTCAAACATAGATCAAAGCTTTATGGGAGTTGTTGGAGGAAAGGTTATTGCAGGTGATGATGTTGTTCTGACTGCTACTATTTTCAAGAACTCTTAG 570 0.3877 MVQPSNVTPLSSTPLSSSDDNTFNDAIDSSSHSKSSSSSSKRTRGRPAGSKNKQKLTFVINRSSEHVEKPILIQIPRNSDVIETLTQFARDYQTSITVQTASGSILNATLRDDSEYEISTFIVHGPFTLVSLSGTCINNNSSTTLSSNFDCFFNICFCSNIDQSFMGVVGGKVIAGDDVVLTATIFKNS* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2733 189 Gene3D - 69 188 - -
Pvu8g2733 189 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 188 - -
Pvu8g2733 189 CDD DUF296 69 182 IPR005175 -
Pvu8g2733 189 MobiDBLite consensus disorder prediction 1 57 - -
Pvu8g2733 189 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 18 188 IPR014476 GO:0003680
Pvu8g2733 189 ProSiteProfiles PPC domain profile profile. 65 189 IPR005175 -
Pvu8g2733 189 Pfam Plants and Prokaryotes Conserved (PCC) domain 69 187 IPR005175 -
Pvu8g2733 189 SUPERFAMILY AF0104/ALDC/Ptd012-like 69 171 - -
Pvu8g2733 189 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2733 Pvu-Chr8 57633383 57633952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2733 41 188 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.228 2.36e-24 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2733 - - var:108336502 238.039