Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2731 ATGGAGTCCAACTTGGGATATTCCAGGATGTTCTTTTTGCTTCTGCTTGGTTCAACTTCATTGATTTTCCTACACTTGGCTTCTGCAGCCACTCCCAAGCTCAACACTCAAGAGGTGAAGGCACTGAAGGAGATAGGGAGCAAGATTGGGAAGAAGGATTGGGACTTTGGAGTGGATCCTTGCAGTGGAAAAGGGAGTTGGAATGCTTCTGATGATAGGAAAGGCTTTGAGAGCTCTGTGATGTGTGATTGTTCCTTCAATAACAGTACTTCTTGCCATGTTGTAAGCATATTCTTGAAGGGTCAGAATCTGTCTGGTAGCCTCTCACCGATGTTTTCCAAGCTTCAGTATCTCACACACTTGGACCTCAGTCGTAACATCATCACTGGTTCTATACCTCCACAGTGGAGTACCATGCGCTTGGTTGAGATCTCTTTTATGGGAAACAAATTATCAGGGCCATTCCCCAAAGTTCTCACCAATATCACAACCCTCAGAAACTTGAGTATTGAAGGAAACCTATTTTCAGGCCACATTCCAACGGAGATTGAGAAGTTGATCAATTTAGAAAAAATCATTCTATCATCCAATGGATTCACAGGAGCATTGCCACCCTCACTTTCCAAGTTGACCAAGTTGATTGATTTGAGGTTAAGCGACAATGATTTCTTTGGGAAGATACCTGATTTCATTAGTAACTGGACAGTGATAGAAAAGCTGCATATGCAGGGTTGCTCACTTGAGGGGCCAATACCTTCTAGTATTTCTGCCTTGACAAGATTAAGTGATTTGAGGATAACTGACCTAAAAGGTGACAAAACCTCAGCTTTCCCTCCACTAAATAACTTGAAATCCATGAAGACACTGGTATTGAGAAAATGCATGATTAAAGGAGAAATCCCAGAATATATTGGGAGAATGGAAAAGCTGAAAATCTTAGATTTGAGTTACAATGGCTTGAGTGGAGAGATACCTGAATCTTTTTCCGAACTTGACAAAGTAGACTTCATGTATCTTACTGGGAACAAGTTATCAGGGACTATACCTGGCTGGGTCCTAGCAAATAACAAAAACATTGATATCTCTGACAATAATTTCTCCTGGGATAGCTCAAGTCCAACTGAATGTCAACGAGGGAGCATAAACCTTGTTGAAAGCTACTCTTCATCTGTAAATACACAAAGTAAGATTCATCCATGCTTAAAAAGGAACTTTCCATGCCCTGCTTCTGTTAGCCAATATCACTACGCCTTGAACATTAATTGTGGTGGTAAGGAAGCAAATATCAGTAATCACATTTATGAAGCTGATGGTGAACGAAAAGGTGCTGCAATGTTATATTATAATAGCCAGGATTGGGCTCTGAGCAGCACTGGAAACTTCATGGACAATGATATTGACTCTGATCCATACATTGTGGCCAATACTTCTAGACTTAATAATGTCTCTGCACTCAACTCACAACTATATACAACAGCTCGTGTTTCTCCCCTCGCTCTCACATACTATGGCCTCTGCCTAATAAATGGAAATTACACAATCAAGCTTCACTTTGCAGAGATTATTTTCATCAATGATAGGTCACTTAATAGTCTTGGAAAGCGGGTATTTGATGTCTATATCCAGGGGAATATAGTGCTGAAAGACTTTGATATCCAAAGAGAAGCTGGTGGTACTGGCAAGCCAATTGTGAAGACATTCAATGCTACTGTCACACAACATACTTTGAAGATTCACTTCTACTGGGCTGGAAAAGGAACCACTGGCATTCCCACAAGAGGAGTTTATGGACCTCTAGTATCTGCTATTTCAGTAAACCCTAATTTTAAACCTCCATCAAGGGATGAAAACAGAACTTATGTCATACTGGCAATTGGCATAGTGGCTGGTGTTTTAGTTCTTCTACTGCTGGGGCTGGTTTTCATGAGGTGGATGGGATGGTTAGGAGGCAAAGATTCAGTGTATAAAGAGCTTAGGGGTATAGACCTGCAGACAGGATTATTTACACTAAGACAAATCAAAGCAGCAACCGAAAACTTCGATGCAGCAAACAAAATTGGCGAAGGTGGCTTTGGTTGTGTTTACAAGGGCCTACTATCAGATGGTACAATAATAGCAGTAAAGCAGCTGTCTTCAAAATCCAAACAGGGAAATCGTGAGTTTGTGAATGAGATGGGATTGATATCTGGACTCCAACATTCAAATCTTGTTAAGCTTTATGGATGTTGTGTGGAGGGGAACCAGCTAATACTGATATATGAGTATATGGAAAATAATTGTCTATCACGGATTCTTTTTGGGAGGAATCCAGAGAGCAGAATAAAACTAGACTGGCCAACAAGGAAGAAAATTTGTCTTGGTATAGCTAAAGCTTTGGCTTATCTTCATGAAGAGTCCAGAATAAAAATCATACATAGGGATATAAAGGCAAGTAATGTATTGCTCGACAAGGATTTCAATGCTAAAGTTTCAGATTTTGGCTTGGCAAAACTCATTGAAGATGACAAAACCCATATTAGCACTCGAGTAGCAGGAACAATTGGTTACATGGCTCCTGAGTATGCAATGCGTGGCTATCTAACTGACAAAGCAGATGTTTATAGCTTTGGGGTGGTTGCACTGGAAACTGTCAGCGGAAAGAGCAATACAAATTTCAGGCCAAACGAAGATTTTGTTTATCTTCTTGATTGGGCCTATGTTTTGCAAGAGAGAGGGAGTCTTCTGGAGCTGGTTGACCCAGATTTGGGTTCAGAGTATTCAAGTGATGAGGCCATGGTGGTGCTAAATGTGGCTCTCTTGTGTACTAATGCATCTCCTACACTCAGACCAACAATGTCCCAAGCTGTGAGCATGCTTGAAGGTTGGACTGATATTCAGGATCTGCTTTCTGATCCGGGATATTCAGCTATTAGTTCCAGTTCCAAATACAAGAGTATAAGAAATCACTTCTGGCAGAATCCTAGTAGAACACATAGCATGTCAATACCTAGTGTGTATACTGATTCCTCTGGCTCTCATGTTGAAACAGAAAAGAGCTATCGTCTTGTAACAGTTAATTCAGATGGATCAGACAAGTCAAACTAG 3084 0.4073 MESNLGYSRMFFLLLLGSTSLIFLHLASAATPKLNTQEVKALKEIGSKIGKKDWDFGVDPCSGKGSWNASDDRKGFESSVMCDCSFNNSTSCHVVSIFLKGQNLSGSLSPMFSKLQYLTHLDLSRNIITGSIPPQWSTMRLVEISFMGNKLSGPFPKVLTNITTLRNLSIEGNLFSGHIPTEIEKLINLEKIILSSNGFTGALPPSLSKLTKLIDLRLSDNDFFGKIPDFISNWTVIEKLHMQGCSLEGPIPSSISALTRLSDLRITDLKGDKTSAFPPLNNLKSMKTLVLRKCMIKGEIPEYIGRMEKLKILDLSYNGLSGEIPESFSELDKVDFMYLTGNKLSGTIPGWVLANNKNIDISDNNFSWDSSSPTECQRGSINLVESYSSSVNTQSKIHPCLKRNFPCPASVSQYHYALNINCGGKEANISNHIYEADGERKGAAMLYYNSQDWALSSTGNFMDNDIDSDPYIVANTSRLNNVSALNSQLYTTARVSPLALTYYGLCLINGNYTIKLHFAEIIFINDRSLNSLGKRVFDVYIQGNIVLKDFDIQREAGGTGKPIVKTFNATVTQHTLKIHFYWAGKGTTGIPTRGVYGPLVSAISVNPNFKPPSRDENRTYVILAIGIVAGVLVLLLLGLVFMRWMGWLGGKDSVYKELRGIDLQTGLFTLRQIKAATENFDAANKIGEGGFGCVYKGLLSDGTIIAVKQLSSKSKQGNREFVNEMGLISGLQHSNLVKLYGCCVEGNQLILIYEYMENNCLSRILFGRNPESRIKLDWPTRKKICLGIAKALAYLHEESRIKIIHRDIKASNVLLDKDFNAKVSDFGLAKLIEDDKTHISTRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALETVSGKSNTNFRPNEDFVYLLDWAYVLQERGSLLELVDPDLGSEYSSDEAMVVLNVALLCTNASPTLRPTMSQAVSMLEGWTDIQDLLSDPGYSAISSSSKYKSIRNHFWQNPSRTHSMSIPSVYTDSSGSHVETEKSYRLVTVNSDGSDKSN* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2731 1027 Gene3D Ribonuclease Inhibitor 35 271 IPR032675 -
Pvu8g2731 1027 CDD STKc_IRAK 686 954 - -
Pvu8g2731 1027 SUPERFAMILY Protein kinase-like (PK-like) 664 982 IPR011009 -
Pvu8g2731 1027 Gene3D - 413 608 - -
Pvu8g2731 1027 Pfam Protein tyrosine and serine/threonine kinase 683 950 IPR001245 GO:0004672|GO:0006468
Pvu8g2731 1027 Gene3D Ribonuclease Inhibitor 272 378 IPR032675 -
Pvu8g2731 1027 ProSitePatterns Protein kinases ATP-binding region signature. 686 708 IPR017441 GO:0005524
Pvu8g2731 1027 Gene3D Phosphorylase Kinase; domain 1 651 755 - -
Pvu8g2731 1027 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE-RELATED 70 996 - -
Pvu8g2731 1027 Pfam Malectin domain 417 603 IPR021720 -
Pvu8g2731 1027 Pfam Leucine rich repeat 286 344 IPR001611 GO:0005515
Pvu8g2731 1027 ProSiteProfiles Protein kinase domain profile. 680 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2731 1027 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 70 996 - -
Pvu8g2731 1027 SMART serkin_6 680 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2731 1027 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Pvu8g2731 1027 SUPERFAMILY L domain-like 82 367 - -
Pvu8g2731 1027 Gene3D Transferase(Phosphotransferase) domain 1 756 964 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2731 Pvu-Chr8 57609291 57619496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2731 216 1016 Receptor kinase-like Gene Family AT1G07650 65.136 0.0 1022
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu8g2731 PK_Tyr_Ser-Thr 7.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2731 - - vun:114195543 1886.31