Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2726 ATGAAGAAACCACCATCTCCCAAATTTCATCAATCTAGCCAAAGGAAACAGAATGCTAATCTCCAATCTCTTGCCAGAGTCAATGATGCAGAGAAGCACAATCCTAGGACCAGTTCTGCACTGAAATCTTTCAAGAATGCTGTGAAGAAATGTGCACAAATTGTTTCATTGTTTCTCCATGGCAAAAGAAAATCAGCCCCTTATGCTGTTGGAAATGATGACAGAAAAAATACATCGAAAGTCAGAGGTGTGGCATCATCATCAACTGATTTATCTTCGGAGAGTAACACCAAGAATTCATCAAAATGGAAGTTTTCTTATTCCTACGCTTCATCTAGCACTGCAAGTGGACAACTTGGAATTGGCAACTTCTCCTTTGAAGAAATTTTCAAGTCAACTGCAAAATTCTCTCCAAATAATGAAATTGGACAAGGTGGCTTTGGAACTGTCTACAAGGGAAAGCTAAATGATGGATCCATAGTTGCCGTAAAGCGTGCCAAGAAGGAAGTAATACACAATCACTTACATGAGTTCAAGAATGAAATATACACCTTGTCTCAAATTGAGCATAGGAATCTTGTGAGATTGTATGGATACTTGGAACATGGAAATGAGAAGATCATTGTTGTTGAATATGTTGGTAATGGTAACCTTCGAGAACACCTTGATGGGATTCGGGGAGAAGGATTAGAAATTGGGGAGCGTCTAGACATAGCAATTGATGTAGCTCATGCAATAACTTACCTTCATATGTACACAGATAATCCAATTATCCATAGAGACATCAAAGCATCAAACATCTTAATCACTGAGAACCTAAAGGCCAAAGTGGCAGATTTTGGTTTTGCACGGTTGTCTGATGATCCTACAGCAACTCATATTTCAACTCAAGTTAAAGGAACAGCTGGATACATGGATCCTGAGTATCTTAGAACATATCAACTCACTGAAAAAAGTGATGTTTATTCCTTTGGTGTATTGCTTGTTGAAATGGTCACAGGAAGACATCCAATAGAACCAAAGAGACCCCTTGATGAAAGAGTGACAATCAGATGGGTAATGAAGATGCTGAAACAAGGGGATGCTGTATTTGCCATGGACCCTAGGCTGAGAAGAAATCCAGCCTCCGTCAAGGCAGTAAAACAGGTTCTCAAGCTAGCTTTTCAATGCGTTGCGCCTTTGAAACAATCACGGCCACCTATGAAGAATTGTGCAGAGGTTCTGTGGGAAATCCGCAAAGGTTTTAGAGATGAAACCAATTCTGATCATCCTTCTCTTCCTTCTCACCATTCTGCAGATTTCCCTAAAAGGGAAAAGAAAAAGCATACAATGTTTGGCATTGAAGATGATGACAGCTATAAATTTGTCTCTGTACCTAATCATATTCATTCATAA 1395 0.3928 MKKPPSPKFHQSSQRKQNANLQSLARVNDAEKHNPRTSSALKSFKNAVKKCAQIVSLFLHGKRKSAPYAVGNDDRKNTSKVRGVASSSTDLSSESNTKNSSKWKFSYSYASSSTASGQLGIGNFSFEEIFKSTAKFSPNNEIGQGGFGTVYKGKLNDGSIVAVKRAKKEVIHNHLHEFKNEIYTLSQIEHRNLVRLYGYLEHGNEKIIVVEYVGNGNLREHLDGIRGEGLEIGERLDIAIDVAHAITYLHMYTDNPIIHRDIKASNILITENLKAKVADFGFARLSDDPTATHISTQVKGTAGYMDPEYLRTYQLTEKSDVYSFGVLLVEMVTGRHPIEPKRPLDERVTIRWVMKMLKQGDAVFAMDPRLRRNPASVKAVKQVLKLAFQCVAPLKQSRPPMKNCAEVLWEIRKGFRDETNSDHPSLPSHHSADFPKREKKKHTMFGIEDDDSYKFVSVPNHIHS* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2726 464 Gene3D Transferase(Phosphotransferase) domain 1 213 429 - -
Pvu8g2726 464 MobiDBLite consensus disorder prediction 66 99 - -
Pvu8g2726 464 ProSitePatterns Protein kinases ATP-binding region signature. 142 168 IPR017441 GO:0005524
Pvu8g2726 464 SUPERFAMILY Protein kinase-like (PK-like) 117 411 IPR011009 -
Pvu8g2726 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Pvu8g2726 464 PANTHER OS01G0253100 PROTEIN 1 446 IPR045271 GO:0004714|GO:0006468
Pvu8g2726 464 ProSiteProfiles Protein kinase domain profile. 136 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2726 464 MobiDBLite consensus disorder prediction 418 441 - -
Pvu8g2726 464 SMART serkin_6 136 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2726 464 MobiDBLite consensus disorder prediction 7 27 - -
Pvu8g2726 464 CDD STKc_IRAK 142 411 - -
Pvu8g2726 464 MobiDBLite consensus disorder prediction 1 41 - -
Pvu8g2726 464 Pfam Protein tyrosine and serine/threonine kinase 139 408 IPR001245 GO:0004672|GO:0006468
Pvu8g2726 464 PANTHER OS02G0821400 PROTEIN 1 446 - -
Pvu8g2726 464 MobiDBLite consensus disorder prediction 81 99 - -
Pvu8g2726 464 Gene3D Phosphorylase Kinase; domain 1 94 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2726 Pvu-Chr8 57585407 57590331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2726 108 411 Receptor kinase-like Gene Family AT1G79620 45.338 2.87e-73 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Pvu8g2726 PK_Tyr_Ser-Thr 3.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2726 - - gmx:100811511 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2726 8 57585407 57590331 Pvu6g0341 6 13444265 13448996 PCT