Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2719 ATGGGTCCAATCTCATCAAACAAATTTTCACCACAAACTTTGGTTCATTTATTAAGAAAAATAAATAAGCTTAACACAAAAGCGGAAAAAGATATAATATTAACTTGGTCCAGAGCATCTACCATTATACCTACAATGATTGGCCATACCATTGCTATCCATAATGGAAAAGAACATTTACCTATTTATATAACAGATCGTATGGTAGGCCATAAATTAGGAGAATTTTCACCTACTCTAAACTTCCGAGGACATGCGAAAAATGATAATAGATCTCGTCGTTAA 285 0.3263 MGPISSNKFSPQTLVHLLRKINKLNTKAEKDIILTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFSPTLNFRGHAKNDNRSRR* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2719 94 Hamap 30S ribosomal protein S19 [rpsS]. 1 91 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pvu8g2719 94 Gene3D 30s Ribosomal Protein S19; Chain A 5 94 IPR023575 GO:0003735|GO:0005840|GO:0006412
Pvu8g2719 94 TIGRFAM rpsS_bact: ribosomal protein uS19 13 94 IPR005732 GO:0003735|GO:0006412|GO:0015935
Pvu8g2719 94 SUPERFAMILY Ribosomal protein S19 10 87 IPR023575 GO:0003735|GO:0005840|GO:0006412
Pvu8g2719 94 PANTHER 37S RIBOSOMAL PROTEIN S19, MITOCHONDRIAL 14 94 - -
Pvu8g2719 94 PRINTS Ribosomal protein S19 family signature 35 54 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pvu8g2719 94 PRINTS Ribosomal protein S19 family signature 55 67 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pvu8g2719 94 PRINTS Ribosomal protein S19 family signature 67 82 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pvu8g2719 94 Pfam Ribosomal protein S19 11 85 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pvu8g2719 94 ProSitePatterns Ribosomal protein S19 signature. 55 79 IPR020934 GO:0003723
Pvu8g2719 94 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 14 94 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2719 Pvu-Chr8 57540953 57541746 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2719 8 80 Cytoplasmic Ribosomal Protein Gene Family AT5G63070 36.842 1.73e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2719 K02965 - gmx:3989336 166.007