Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2714 ATGTCAATAGGAGAAAGTCATGGTGGTAATGGCTTTCAAATTTATGGTTGTGATGTTATGAACCCTGCTTTCACATCCACAGACACAAATGAATTCTTATGTGCCCACTTCCTTCATCAAAAACAACAGCAACAAGCAAGGAACAGTGATGATTGTGCTTTTTCTGAGGGTGCTTTTTCTGAGGAGGCTTTTAAGTGGACAAACATCAACCACAACCTTACACTGTGCCTGGAAGACATGCAGGTTTCATGCAAGAACACAAAAGTTGTGGGAAGGAGAAGGAAGAAACAATCTTCTGTGTCTTGGATCAAAGGACAATGGAACAAAGAAGAGGACAGAAAACTAATAAGGTTGGTGAAACAACATGGTGATAGAAAATGGGCTGAAATAGCTGAGAATTTGGAGGGAAGAGTTGGCAAACAGTGTAGAGAAAGATGGAATAATCATTTGCGTCCTGATATTAAGAAAGATAGTTGGAGTGAAGAAGAAGAGAGGATCCTAGTAGAGATGCATGCGAGCCTTGGAAATCGTTGGTGCGAGATGGCAAAACGCCTTGCAGGAAGATCAGAGAATGCCATAAAGAACCACTGGAATGCCACCAAAAGGAGACTCAACTCAAAGAGAAAGCACAAGAAAACCAAAAATGGAAAACCACATTCCTCCATTCTCGAAGACTACATCAGAAGCAAGACCCTCATCACCACAAACCCTACACCTCTCATCATCACTGCCCCACAGGAAAATGCACCTAACCCTTTAAACCATGTCTTCCATGAACCTTTTGCTAACGATCTACTCTTCATGCAACAAATTTGCATGGAGAATGTTGATGCCTCTAAGCACCCCAAGATGTCTCCAACCTCATATCTGGATTGCTGGAACATGAATGTTGATGATATGGATGAGAGTGAGTTTTTGTATTCTCAGCAATTCTCAGATAATATGCAGTTGAATGATAGTCTCTTCCCTAGAGAGACTCATGCTCATCCTCCAGGTAACTACCTTCCTTCGGATCTATATGTATCTCCCTTCGGATATGGAAATCAGAATCTAAACATAGATTTTCGGCATCAAGGTTGCTCACAAGTAAAAGGAGAGGACATTTGGTAG 1110 0.4153 MSIGESHGGNGFQIYGCDVMNPAFTSTDTNEFLCAHFLHQKQQQQARNSDDCAFSEGAFSEEAFKWTNINHNLTLCLEDMQVSCKNTKVVGRRRKKQSSVSWIKGQWNKEEDRKLIRLVKQHGDRKWAEIAENLEGRVGKQCRERWNNHLRPDIKKDSWSEEEERILVEMHASLGNRWCEMAKRLAGRSENAIKNHWNATKRRLNSKRKHKKTKNGKPHSSILEDYIRSKTLITTNPTPLIITAPQENAPNPLNHVFHEPFANDLLFMQQICMENVDASKHPKMSPTSYLDCWNMNVDDMDESEFLYSQQFSDNMQLNDSLFPRETHAHPPGNYLPSDLYVSPFGYGNQNLNIDFRHQGCSQVKGEDIW* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2714 369 Pfam Myb-like DNA-binding domain 107 164 - -
Pvu8g2714 369 CDD SANT 158 201 IPR001005 -
Pvu8g2714 369 SUPERFAMILY Homeodomain-like 101 197 IPR009057 -
Pvu8g2714 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 155 205 IPR017930 -
Pvu8g2714 369 CDD SANT 107 150 IPR001005 -
Pvu8g2714 369 ProSiteProfiles Myb-like domain profile. 104 150 IPR001005 -
Pvu8g2714 369 SMART sant 155 203 IPR001005 -
Pvu8g2714 369 SMART sant 103 152 IPR001005 -
Pvu8g2714 369 Gene3D - 103 155 - -
Pvu8g2714 369 ProSiteProfiles Myb-like domain profile. 151 201 IPR001005 -
Pvu8g2714 369 PANTHER MYB PROTEIN-RELATED 4 357 - -
Pvu8g2714 369 Gene3D - 158 222 - -
Pvu8g2714 369 PANTHER MYB TRANSCRIPTION FACTOR 4 357 - -
Pvu8g2714 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 154 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2714 Pvu-Chr8 57495534 57499501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2714 95 347 MYB Transcription Factor Family AT5G11050 42.553 7.45e-65 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu8g2714 Myb_DNA-bind_6 3.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2714 K09422 - gmx:102668713 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0676 6 18275268 18280565 Pvu8g2714 8 57495534 57499501 PCT