Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2702 ATGGTCATGAGCACCTACTCTGAGGGCACCACATCAAGACCAATGGCACCCACCATGGAGGATGAGGATTTGGAGAACAGCAATGAGAAGACAGCAATGGTGAGAAAGAATTCAGAAGTAGTTGTGGTGGGAAGTAATAATGGCCGTGTACAAATGCTTAGGAATGTCATGACCAATTTGCAAGTGGTGTTTCTTGGTACTAAGCTTCTTCTGCTTTTTCCAGCAGTCCCTTTGGCTGTTGTTGCAACTTTTTATGGCTTTGGAAGGCCTTGGATTTTTGCTTTCAGCCTCCTTGGACTTGCTCCTCTAGCTGAACGTGTCAGCTTCCTCACTGAGCAAATTGCATATTATACTGGTCCAACAGTTGGAGGGCTTCTTAATGCAACCTGTGGAAATGCAACCGAGATGATCATAGCATTATTAGCACTTCATCAGAACAAAGTAAATGTTGTGAAGTTGTCCTTGCTTGGTTCCATTCTCTCAAACCTTCTCTTGGTTCTTGGAAGCTCACTCCTCTGTGGTGGTTTAGCCAATCTCAAGAGAGAGCAAAGATATGACAGAAAACAGGCTGATGTAAACTCACTGCTTCTGTTGCTGGGGTTGCTGTGCCATTTGCTGCCATTGCTGTTCAGATGCGCCTTAGGAGGGCCCCATCATTCCATAGCTGCTAACATTCTTCAGTTGTCCAGAGCAAGCAGTGTTGTTATGCTTCTAGCATACCTTGCTTACATCTTCTTCCAGTTAAAAACTCACAGAAAATTGTTTGATGCACAAGGGGAGGAGGAAGATGAAGAGAAGGCAGTGATAGGATTTTGGAGTGCATTTACATGGTTGGTGGGTATGACATTGGTCATATCTTTGCTTTCTGAATATGTAGTGGGAACAATTGAGGCTGCTTCAGAGTCTTGGGGCATTTCTGTGAGCTTCATTAGCATAATTTTGCTACCAATTGTTGGAAATGCAGCAGAACATGCTGGTTCAATCATATTTGCTTACAAGAACAAGTTGGACATATCTTTGGGAGTGGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGGTTGTTGCATGGATAATGGGTATAAGAATGGATTTGGACTTCAGTCTTCTTGAAACCGGATGTCTTGCTTTTACCATTATAATCACTGCCTTCACTTTACAGGATGGAACTTCACACTACATGAAGGGAGTGGTTCTTACTCTATGTTACATTGTGATTGCTGCATGCTTTTTTGTTCTCAAAACTCCTCTAACTGGCCAAAATTCCATGGCAAACTTTGGAGATAACTAA 1308 0.4258 MVMSTYSEGTTSRPMAPTMEDEDLENSNEKTAMVRKNSEVVVVGSNNGRVQMLRNVMTNLQVVFLGTKLLLLFPAVPLAVVATFYGFGRPWIFAFSLLGLAPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIIALLALHQNKVNVVKLSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLLFRCALGGPHHSIAANILQLSRASSVVMLLAYLAYIFFQLKTHRKLFDAQGEEEDEEKAVIGFWSAFTWLVGMTLVISLLSEYVVGTIEAASESWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLGVAMGSATQISMFVVPLSVVVAWIMGIRMDLDFSLLETGCLAFTIIITAFTLQDGTSHYMKGVVLTLCYIVIAACFFVLKTPLTGQNSMANFGDN* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2702 435 TIGRFAM caca2: calcium/proton exchanger 55 417 - -
Pvu8g2702 435 TIGRFAM cax: calcium/proton exchanger 74 417 IPR004798 GO:0006816|GO:0015369
Pvu8g2702 435 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 22 428 IPR004713 GO:0006812|GO:0008324|GO:0016021
Pvu8g2702 435 PANTHER VACUOLAR CATION/PROTON EXCHANGER 22 428 - -
Pvu8g2702 435 MobiDBLite consensus disorder prediction 1 28 - -
Pvu8g2702 435 Pfam Sodium/calcium exchanger protein 274 415 IPR004837 GO:0016021|GO:0055085
Pvu8g2702 435 Pfam Sodium/calcium exchanger protein 91 248 IPR004837 GO:0016021|GO:0055085
Pvu8g2702 435 Gene3D - 120 268 IPR044880 -
Pvu8g2702 435 Gene3D - 269 418 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2702 Pvu-Chr8 57412007 57415762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2702 28 422 Antiporters AT2G38170 67.327 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2702 K07300 - gmx:100816844 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0711 6 18637654 18640952 Pvu8g2702 8 57412007 57415762 PCT