Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2685 ATGTCTTGCTCCGTCGCGGTTTCCAATTCGCCGGTCTTCTCTCCCTCCTCTTCTCTCTTCTGCTCTAAGCCTTCCATCATCTCTTCTTCGCCCGAATCCCTTTCGCTCTCCCTCTCCCACCTCAAGCCTTCCAACACTAACACCGCCTCCTCTTGCTCTTCTCCTTCTGCTGCGCCTGCTTCCTCCTCTCCTTCTTCCCCCTTTCGCCTTCGCCTTCCCAAGCCTCCCTCTGTCTTCTCTGCCTCCTCTGCCTCCTCCACCTCCCCCAACGGCACCATTTTGAAGAGGAAGCGACCCGCCAGGCTCGACATACCCGTTTCCTCTCTCACCTTCGGGGTTCCGCCCACGCCCTCCGCTGCGGCGCGTGACGTCGTCGAGTCGGAGGAGGATGGCTTTGGGGTCTACTGCAAGAGAGGGAGGAGGGAGTACATGGAGGATCGTTACACCGCTGGGGATAATCTACGCGGTCAACACAAACTGGCTTTTTTTGGCATATTTGATGGGCACGGAGGTGCAAAGGCTGCGGAATTTGCTGCAAATAACTTAGAAAAGAATATCTTAGATGAGGTGATTGTGAGAGATGAAGATGATGTTGAGGAGGCAGTGAAGCGTGGGTACCTCAACACAGACTCAGATTTCCTGAAGAAGGATCTCCATGGTGGCTCTTGCTGTGTGACAGCATTGATCAGGAACGGCAACCTTGTTGTGTCCAACGCCGGTGATTGCCGTGCTGTCATTAGCAGAGGGGGTGTTGCGGAAGCCCTAACATCCGATCACAGGCCCTCAAGGGAAGATGAAAGGGACAGAATTGAGAACCTGGGTGGTTATGTGGATTTATGCCGCGGAGTTTGGAGGATCCAGGGATCTCTTGCAGTGTCTAGGGGAATTGGAGATAGACACCTGAAACAATGGGTGACAGCAGAACCTGAGACCAAAGTTCTCAGAATTGAACCTGAACATGACTTGTTAATCTTAGCTTCAGATGGACTATGGGATAAGGTTAGTAATCAAGAAGCTGTGGACATTGCTCGTTCTTTTCTTGTGGGCAACAACAAATCACAACCATTGGTGGCTTGTAAAAAGCTTGTAGATTTGTCTGTTTCACGAGGCTCTATGGATGATACAAGCGTTATGCTAATCAAATTAGAACACTATGTTTAG 1161 0.5099 MSCSVAVSNSPVFSPSSSLFCSKPSIISSSPESLSLSLSHLKPSNTNTASSCSSPSAAPASSSPSSPFRLRLPKPPSVFSASSASSTSPNGTILKRKRPARLDIPVSSLTFGVPPTPSAAARDVVESEEDGFGVYCKRGRREYMEDRYTAGDNLRGQHKLAFFGIFDGHGGAKAAEFAANNLEKNILDEVIVRDEDDVEEAVKRGYLNTDSDFLKKDLHGGSCCVTALIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDERDRIENLGGYVDLCRGVWRIQGSLAVSRGIGDRHLKQWVTAEPETKVLRIEPEHDLLILASDGLWDKVSNQEAVDIARSFLVGNNKSQPLVACKKLVDLSVSRGSMDDTSVMLIKLEHYV* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2685 386 CDD PP2Cc 131 382 IPR001932 -
Pvu8g2685 386 MobiDBLite consensus disorder prediction 78 93 - -
Pvu8g2685 386 ProSiteProfiles PPM-type phosphatase domain profile. 131 382 IPR001932 -
Pvu8g2685 386 PANTHER PROTEIN PHOSPHATASE 2C 3 385 IPR015655 GO:0004722|GO:0006470
Pvu8g2685 386 MobiDBLite consensus disorder prediction 40 68 - -
Pvu8g2685 386 ProSitePatterns PPM-type phosphatase domain signature. 162 170 IPR000222 GO:0043169
Pvu8g2685 386 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 3 385 - -
Pvu8g2685 386 SUPERFAMILY PP2C-like 132 383 IPR036457 -
Pvu8g2685 386 Pfam Protein phosphatase 2C 132 374 IPR001932 -
Pvu8g2685 386 SMART PP2C_4 125 380 IPR001932 -
Pvu8g2685 386 Gene3D - 131 385 IPR036457 -
Pvu8g2685 386 MobiDBLite consensus disorder prediction 40 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2685 Pvu-Chr8 57247519 57249801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2685 1 386 PP2C-type Phosphatase Gene Family AT2G30020 63.930 2.43e-168 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2685 K17506 - gmx:100797934 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2685 8 57247519 57249801 Pvu8g2685 8 57247519 57249801 ECH
Pvu6g0727 6 18882683 18885120 Pvu8g2685 8 57247519 57249801 ECH
Pvu6g0727 6 18882683 18885120 Pvu8g2685 8 57247519 57249801 PCT