Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2680 ATGCCGACTCAATCCGAGTCACCCAGTAACTCACTGAGTCAACTCGCTCAGAACCTGTTCTCCGACAGCAACAGCAGCATCATGCTCGCAGCCATTCTTTCCTTGCTCCTAGTCATCCTCTTTGTCCTCCTACTCCACGTGTATGCCAAGTGGTTCTTATCTCAGTCGCAATTACATTCTCACACTCGCCGGTGGCGAACTCCGGTGACCGTCTCCGGCGTTCTGGAACCTTCTCATTTCAACAGCATCAACATAGAAGCGTCACCCACCTGCACCAAGGGCCTGGATTCAGCGACAGTTTCAGCAATTCCCATGTTTGAGCACAAAACAGAAAAAACAGAGGAATTGGAATGTGTGGTTTGTTTGAGCGTAATTGAGGAGGGTGAGATGGGAAGGAGATTGCCAAAGTGTGGCCACGCTTTTCACGTGGAGTGCATTGACATGTGGTTCACTTCACATTGCAATTGTCCCATTTGTAGAGCTCCTATTCTGGTGAACGATGATTCTCAATCGGGTTCTGATGACGTGTTTGAGATTGTGGTTGTTACTCCTGGTTATGAGATTAGTGAGAGTGAGAGTGGTTCTGTTCCAGAAAATTCTTCTTCTTTGTTGGGTTTCTCTCTGAAGAGATTGCTGATCATGATGAAGTAG 651 0.4731 MPTQSESPSNSLSQLAQNLFSDSNSSIMLAAILSLLLVILFVLLLHVYAKWFLSQSQLHSHTRRWRTPVTVSGVLEPSHFNSINIEASPTCTKGLDSATVSAIPMFEHKTEKTEELECVVCLSVIEEGEMGRRLPKCGHAFHVECIDMWFTSHCNCPICRAPILVNDDSQSGSDDVFEIVVVTPGYEISESESGSVPENSSSLLGFSLKRLLIMMK* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2680 216 CDD RING-H2_EL5_like 117 160 - -
Pvu8g2680 216 Pfam Ring finger domain 117 160 IPR001841 -
Pvu8g2680 216 PANTHER - 1 212 - -
Pvu8g2680 216 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
Pvu8g2680 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 169 IPR013083 -
Pvu8g2680 216 SUPERFAMILY RING/U-box 108 168 - -
Pvu8g2680 216 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 1 212 IPR044675 -
Pvu8g2680 216 SMART ring_2 118 159 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2680 Pvu-Chr8 57187280 57189194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2680 17 161 Rapid Response to Elicitors AT3G16720 39.216 1.92e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2680 - - gmx:100777829 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2680 8 57187280 57189194 Pvu8g2680 8 57187280 57189194 ECH
Pvu6g0732 6 18939698 18940811 Pvu8g2680 8 57187280 57189194 PCT