Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2678 ATGGCATTGAAGAAGTTCATAATCCGAAGGTACGAGGGTCACTCTGATAGAGCTCAGGTAGAAGATCTTGAGAGAAGATGCAAGGTAGGGCCATCAGAAAGCGTGCTAGACACTATGGGGGACCCCATGTGTAGGATCAGAAACAGTCCCATGTACATAATGCTGGTAGCAGAGATGGAGAATGAATTGGTTGGTGTCATTCAAGGCTTAATAAAAATGGTGAAAGTTCACACTCATCCGCCAAAGGATATGGCAAAGGTGGGGTATGTCTTAGGCCTCAGAGTTTCTCCTCATAGTAGAAGAAAAGGCATTGGATCAAGTCTAGTGCAAAGGTTAGAAGAGTGGTTCACTTCCAATGATGTGGAATATGCATACATGGCCACAGAGAAAGAAAACCACGCCTCAATCAACCTCTTCATGGAGAAGTATTGCTACACCAAGTTTAGGACTCCAACTATACTCATAAACCCAGTGAATCATCATCTGTTTCAAATCTCATCCAACATAGAGATAGCTATGGTGAAGGTTGAAAAGGCTGAATCCCTCTATAGAAGGTTCATGGGATCCACTGAGTTCTTCCCTAGTGACATAGAGAATATACTAAGGAACAAGCTAAGCTTGGGAACTTGGGTGGCTTATTTCAAAGGGGATAGTGATTTTGGTTTAGATGGAGAAGTTCCCGATAGTTGGGCTATGCTTAGTGTTTGGAACTGTGGGGAAATCTTCAAGCTAAGGCTAGGGAAAGCACCTTTGTCTTGCATGTTATTCACAAAGAGTTGGAGCTTGATTGGTAGAATGTTCCCATGCATGAAATTGCCAACCTTGCCCAATTTCTTTAGTCCTTTTGGGTTCTACTTCATGTATGGTGTGTACCAAGAAGGGCCATTCTCTGGAAAGTTGGTTAGGGCATTGTGCCAGTTTGTGCACAACATGGCTTCTAGGAGTGAACAGAGCAAGATCATTGTGACAGAAATTGGAGGAAGAGATGATCTGATTCATCATATTCCACATTGGAAATTGCTCTCATGCCAGGACTTGTGGTGCATAAAGGCTTTGAACAATGAAGGAACTAACAAGTTTCATGAATTGAGCAACACTCAATCATCAATAACACTCTTTGTAGACCCACGAGAGGTTTAA 1140 0.4254 MALKKFIIRRYEGHSDRAQVEDLERRCKVGPSESVLDTMGDPMCRIRNSPMYIMLVAEMENELVGVIQGLIKMVKVHTHPPKDMAKVGYVLGLRVSPHSRRKGIGSSLVQRLEEWFTSNDVEYAYMATEKENHASINLFMEKYCYTKFRTPTILINPVNHHLFQISSNIEIAMVKVEKAESLYRRFMGSTEFFPSDIENILRNKLSLGTWVAYFKGDSDFGLDGEVPDSWAMLSVWNCGEIFKLRLGKAPLSCMLFTKSWSLIGRMFPCMKLPTLPNFFSPFGFYFMYGVYQEGPFSGKLVRALCQFVHNMASRSEQSKIIVTEIGGRDDLIHHIPHWKLLSCQDLWCIKALNNEGTNKFHELSNTQSSITLFVDPREV* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2678 379 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 208 IPR000182 GO:0016407
Pvu8g2678 379 Gene3D - 7 148 - -
Pvu8g2678 379 CDD NAT_SF 54 125 - -
Pvu8g2678 379 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 379 - -
Pvu8g2678 379 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 7 152 IPR016181 -
Pvu8g2678 379 Pfam Acetyltransferase (GNAT) family 43 141 IPR000182 GO:0016407
Pvu8g2678 379 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2678 Pvu-Chr8 57175476 57176928 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pvu8g2678 Acetyltransf_1 1.3e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2678 - - gmx:100799505 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2678 8 57175476 57176928 Pvu8g2678 8 57175476 57176928 ECH
Pvu6g0738 6 18975467 18977108 Pvu8g2678 8 57175476 57176928 PCT