Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2674 ATGGCACCATTCACTCCATCCAATTTATTGCCGGCGGTGCTGACCCTGTTTTTGGCGTTCAGTCAGAAACAGAGTCTCTGTTCGACGCTCGAGAGCGAAGGTTTGGCGCTGCTGGCGTTGAAGGAGAGCGTGGTGACGGACCCGCAGGGGGCTTTATCAAGCTGGAGTGGTGAAAATGGAGACGTTATCGATCCATGCTCGTGGTTCGGTGTGGAGTGCTCTCACGGTAATGTTGTGACCTTGAATTTGAAAGACCTTTGTCTTGAAGGAACACTAGCACCAGAAGTTGGAATGCTGACTCACATAAAATCAATCATTTTGCGCAACAATTCTTTCTTTGGAGAAATTCCTGCGGAGATCCTATACTTACAGGAGCTGGAAGTCCTTGACTTGGGACATAACTACTTTAGCGGATCACTTCCATTTGACCATGGCAATATGCCATCCCTGACCACTCTTCTATTGGACAACAATTACCATCTGACCAACTTAAATCCAGAGCTGTATAAGTTCAAGATGAATTCTAAATTTCATGATGATGAGGAACAACTAACTGGTGCCACCACTACTAGAGAAGCATATGTTGGCAGATGTAGTTTATGGCACATTGGCCAACATGGGGATGGAGCATACAGGAGGCAACTTCTAAAAGTAGCAAATGCTGCTAATACACCCGGAATCGAAAGGCATGTTAACCAAGGGATACTTCAACAATTAGCATCGCATTTCCCTTTTTCATTACCGCCAAATTTTAAGCCTTTCTCATCATCACCATCACTTTCACCGTCAGAAAGTCCCTCATATTCGCCATCACCATCTCCCTCAGATATTTTTCTCACTCCTTCGCCCTCTCCTTCGCCTGTAGTGTCACTAACTCCAGACGTCTCACCCCCAGCAAACACTCCTCTCACTGTGTCTACACCGCCAGTTAATTGGGTTCCAGCACCTAGCCCTTCTGCATTTTCTACCCACGGGAGCACATACAATTCCAATCAAATACATCACTCGGCAATAATCTGGTCTGTAGTTGGGGGTTTCTCTTTATTGATTTTGGTGTCAGCCATTTTTGCATGCTTTCGAAGTAGGAAGGTTGTGACTGTTAAACCTTGGTCCACAGGATTGAGTGGCCAGCTGCAGAAAGCCTTTGTAAAAGGTGTGCCAAGTCTCAAACGAGGAGAAATTGAAGCAGCTTGTGAATATTTCAGCAACATTATCGGTTCGCTTCCTGATGGAACTGTGTATAAGGGGACTCTCTCTAGTGGAGTCGAGATAGCTGTAGCATCCTCTGCAGTAAACACAGCTCAAAAATGGTCAAAAAGTATGGAAGCTCAGTTCAGAAATAAGATAGCAACATTGTCTAGAGTGAATCACAAGAATTTTGTGAATCTAATTGGGTACTGCGAAGAGAATAAGCCATTCTCAAGAATGATGGTGTTTGAGTACGCTCCGAATGGAACACTCTTTGAGCATATACACATTAGAGAAGCAGAAGAACTAAATTGGACAATGAGAATGAGGATAGCTATGGGAATAGCCTACTGCCTAGAGTATATGCATGACCTAAAACCCTCCATTGCCCATAGAAACCTGCAATCTTCATTTATATACCTTACTGAAGATTATGCTGCTAAAATATCAGATCTTAGTTTATGGAATGACATGTGTGCGGCAAAGAATGGGTCTGCAACCACACAACTCTTGGAAACATCATCAGCAGATGCCAAGGACAATGTTTACAGCTTTGGAATAATACTGTTTGAGTTGATTACGGGGAAAATCCCCCTTGCCGGGAACAATGAACTTCTGGCAGATTGGGCAGCGGAATATTTAAGGTGGGGGAAATCCTTAAGAGATGTTATGGATCCAAGACTGAACTCTTTGCAGGAAGAAGAGATTGAAGAATGGTCTGAAGTGATAAGAAACTGTGTACATCCAGATCGAGAGAAACGGCCAACTATGAAAGAAGTAACATCTAGACTCAAGGAAATAACAGCTATGGGGCCTGATGGAGCAAATCCAAAAGCATCACCACTTTGGTGGGCAGAAATGGCAATTACGTCCACTGATTCAAGTTGA 2076 0.4383 MAPFTPSNLLPAVLTLFLAFSQKQSLCSTLESEGLALLALKESVVTDPQGALSSWSGENGDVIDPCSWFGVECSHGNVVTLNLKDLCLEGTLAPEVGMLTHIKSIILRNNSFFGEIPAEILYLQELEVLDLGHNYFSGSLPFDHGNMPSLTTLLLDNNYHLTNLNPELYKFKMNSKFHDDEEQLTGATTTREAYVGRCSLWHIGQHGDGAYRRQLLKVANAANTPGIERHVNQGILQQLASHFPFSLPPNFKPFSSSPSLSPSESPSYSPSPSPSDIFLTPSPSPSPVVSLTPDVSPPANTPLTVSTPPVNWVPAPSPSAFSTHGSTYNSNQIHHSAIIWSVVGGFSLLILVSAIFACFRSRKVVTVKPWSTGLSGQLQKAFVKGVPSLKRGEIEAACEYFSNIIGSLPDGTVYKGTLSSGVEIAVASSAVNTAQKWSKSMEAQFRNKIATLSRVNHKNFVNLIGYCEENKPFSRMMVFEYAPNGTLFEHIHIREAEELNWTMRMRIAMGIAYCLEYMHDLKPSIAHRNLQSSFIYLTEDYAAKISDLSLWNDMCAAKNGSATTQLLETSSADAKDNVYSFGIILFELITGKIPLAGNNELLADWAAEYLRWGKSLRDVMDPRLNSLQEEEIEEWSEVIRNCVHPDREKRPTMKEVTSRLKEITAMGPDGANPKASPLWWAEMAITSTDSS* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2674 691 PANTHER PROTEIN MALE DISCOVERER 2 12 690 - -
Pvu8g2674 691 MobiDBLite consensus disorder prediction 256 306 - -
Pvu8g2674 691 Pfam Protein tyrosine and serine/threonine kinase 404 660 IPR001245 GO:0004672|GO:0006468
Pvu8g2674 691 SUPERFAMILY L domain-like 27 170 - -
Pvu8g2674 691 ProSiteProfiles Protein kinase domain profile. 399 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2674 691 Gene3D Phosphorylase Kinase; domain 1 367 481 - -
Pvu8g2674 691 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Pvu8g2674 691 Gene3D Transferase(Phosphotransferase) domain 1 482 670 - -
Pvu8g2674 691 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 12 690 - -
Pvu8g2674 691 MobiDBLite consensus disorder prediction 256 275 - -
Pvu8g2674 691 SUPERFAMILY Protein kinase-like (PK-like) 394 660 IPR011009 -
Pvu8g2674 691 MobiDBLite consensus disorder prediction 276 292 - -
Pvu8g2674 691 Gene3D Ribonuclease Inhibitor 29 200 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2674 Pvu-Chr8 57143409 57150287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2674 12 667 Receptor kinase-like Gene Family AT2G01210 24.291 3.58e-45 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pvu8g2674 PK_Tyr_Ser-Thr 2.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2674 - - gmx:100779427 1075.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0750 6 19108973 19114697 Pvu8g2674 8 57143409 57150287 PCT