Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2671 ATGGCTGCAGCTTTAGAGTGCTGGTCCAGCCGCGCCACCACCGCCGCCGACGATGACACGGTGGAGCAGGTCCTCATGCGCACCCATCACAGATCCGAAGGCTCGGCTTCCACCCCCAAGGACCCCTCCTCCATCCCCAACGTCCACAAGAAGTTTCAGAAACTCACCCGCAACGTCTCTGAAGCCATCGCCTCCTTCAGAAACTCGCTCAACCTCGATTCACCTCCTTCCTCCAAAGCTGATGCCTCTTCCCGGAAACTTGCCTGGGGAAGTGTCGTTCGCAACCTCACTCAGCTCTACCCCGGAAGCCAACTCCCCGAGAAACTCATGTCAAACATCCGCAAGCATTATGATTCATTGCCCCTCAGTTATGCACAGGCTGAGTTTGATATGAAGGATGTGTTTCTTCACATAAAGTTGATGGAGCAAGCTTCGGAGAGTGACCAGCCTGCGATTTTGATTCAAGAGGAGTGTGATGATGAGGTTCAAGGTACTGCTCTGAGGCTCACGTTTGCTTGCAACTCTCCAATTTCGTGGCCTGCGATGTCGGGGGCATTGGATAGTTCCTCCATTTGCTGCAAGAGGATGCAGATCTTTGAGAAGAAGGGTTTCACCTTGGGAGTTGTGCTTCTTGTGGTTCAGTCTGGGCATGATAAGTTGGTGAGGACCAGGGTTGAAAATGCTCTGAAGTTTGCTATGAAGAAGCCTAAAACTGGTGCTGTGAAGCTTCCTTTCGGGCTTTGTGGGTGCCAGGAGGAAAATTCCAAAGGGAGAGATCTTGTGGAGATTGAAGAAGAAAACGGTGATGGTTACCGGGGAAAGGAGTTTGAGAATTCAAGTCAAAGGATTCAGCTTCAGGTGCCTTTGCCTTCTTCATGTTTTGTTGTTTCAGTGGATGAATGGCAGACCGTAAAGTCAGGTGGGGATGAGATTGAGAAATGGTTGTTGAACTCAGATAGTGTTGAGTTTGTAGAGCAGATGGGGCCAAATTCGTATAAGGGAGTATATATGGGAAAGAGGGTTGGGATTGAGAAGCTGAAGGGATGTGATAAAGGGAATTCTTATGAGTTTGAGCTCCACAAAGATCTGCTGGAACTCATGACTTGTGGTCATAGGAACATTTTGCAGTTCTGCGGTATTTGCGTGGATGATAATCATGGGTTGTGCGTGGTGACCAAGTTCATGGAAGGTGGATCTGTTCATGATCTGATGTTGAAGAACAAGAAGCTGCAGAATAAGGATATTGTGAGGATTGCAGTTGATGTGGCTGAAGGGATCAAGTTTATGAATGAACATGGTGTTGCATATAGAGACCTTAATACACAGAGAATTCTGTTGGATAGGCACGGAAATGCTTGCTTGGGAGATATGGGTATCGTCACTGCCTGCAAGAGTGTTGGAGAAGCTATGGAGTATGAAACTGATGGTTACAGGTGGCTAGCTCCTGAGATAATAGCAGGGGACCCAGAGAATGTGACAGAGACATGGATGAGTAATGTGTATAGTTTTGGGATGGTAATTTGGGAGATGGTAACTGGTGAGGCAGCATATTCTTCATTTTCACCTGTGCAAGCAGCAGTGGGCATTGCTGCATGTGGCCTTAGACCTGAAATCCCAAAAGACTGCCAACAAACTCTAAAATACATTATGACAAAGTGCTGGAACAACACCCCTTCCAAACGCCCTCAGTTCTCTGAAATCTTAGCCATATTGCTGCGACCAAACAACAACAACAGATAA 1740 0.4747 MAAALECWSSRATTAADDDTVEQVLMRTHHRSEGSASTPKDPSSIPNVHKKFQKLTRNVSEAIASFRNSLNLDSPPSSKADASSRKLAWGSVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPLSYAQAEFDMKDVFLHIKLMEQASESDQPAILIQEECDDEVQGTALRLTFACNSPISWPAMSGALDSSSICCKRMQIFEKKGFTLGVVLLVVQSGHDKLVRTRVENALKFAMKKPKTGAVKLPFGLCGCQEENSKGRDLVEIEEENGDGYRGKEFENSSQRIQLQVPLPSSCFVVSVDEWQTVKSGGDEIEKWLLNSDSVEFVEQMGPNSYKGVYMGKRVGIEKLKGCDKGNSYEFELHKDLLELMTCGHRNILQFCGICVDDNHGLCVVTKFMEGGSVHDLMLKNKKLQNKDIVRIAVDVAEGIKFMNEHGVAYRDLNTQRILLDRHGNACLGDMGIVTACKSVGEAMEYETDGYRWLAPEIIAGDPENVTETWMSNVYSFGMVIWEMVTGEAAYSSFSPVQAAVGIAACGLRPEIPKDCQQTLKYIMTKCWNNTPSKRPQFSEILAILLRPNNNNR* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2671 579 ProSiteProfiles Protein kinase domain profile. 321 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2671 579 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 575 - -
Pvu8g2671 579 PANTHER SERINE-THREONINE PROTEIN KINASE 1 575 - -
Pvu8g2671 579 Pfam Protein tyrosine and serine/threonine kinase 356 570 IPR001245 GO:0004672|GO:0006468
Pvu8g2671 579 PRINTS Tyrosine kinase catalytic domain signature 392 405 IPR001245 GO:0004672|GO:0006468
Pvu8g2671 579 PRINTS Tyrosine kinase catalytic domain signature 428 446 IPR001245 GO:0004672|GO:0006468
Pvu8g2671 579 PRINTS Tyrosine kinase catalytic domain signature 498 520 IPR001245 GO:0004672|GO:0006468
Pvu8g2671 579 PRINTS Tyrosine kinase catalytic domain signature 542 564 IPR001245 GO:0004672|GO:0006468
Pvu8g2671 579 Gene3D Transferase(Phosphotransferase) domain 1 314 575 - -
Pvu8g2671 579 MobiDBLite consensus disorder prediction 28 47 - -
Pvu8g2671 579 SUPERFAMILY Protein kinase-like (PK-like) 309 571 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2671 Pvu-Chr8 57114970 57119445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2671 309 571 MAP Kinase Kinase Kinase AT2G17700 33.704 1.06e-51 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Pvu8g2671 PK_Tyr_Ser-Thr 7.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2671 - - pvu:PHAVU_008G258400g 1167.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2671 8 57114970 57119445 Pvu8g2671 8 57114970 57119445 ECH
Pvu6g0757 6 19189361 19193399 Pvu8g2671 8 57114970 57119445 PCT