Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2660 ATGGGATGCACTTCACTACTGAGAAGCCCCAAGAAGGAAGAACAAGAGGTACCAGATGCTTTCACCTCCTTGTTACCAAATTCTAACCAATCTTACACCTATGAAGATTTCAATATTTTGGAGGAACTGGAAGGGGTCTTCAACTCCAAGGAGGAACAAGAGTTGCTGCAACAGAACTCTTCAAGTGGGGAACTTCATTGGGATTTCATGGAATGGGAGGAATTGGCCCCCTTTGGAGAGGAAGGAGAAGATGAAAACGAAGGGAAAGAACAGGTGACAGAGAGCATGAGCCAGTACCCTTTTGAGGAGCAGCAGATAAAGAGAGAAAACATAGTTGGGTTCTGGGAAATGGATGATGAGAAGATGCTGTCTTTGAACTTGAACTTGAACTATCAAGAGGTTTTGGATGCATGGTCTAACCGAGGCTCTCTCTGGGCTGATGAATGCTCTCTTTCATTGGCCACCAATAATAGCTGCTATAATGGAGAAGTGCCAGTGTTGGAAGAAGAGAGAGCAAGAAGAGAAGCAAGTGTTCTTAGATACAAAGAGAAGCGTCAGAACAGATTGTTCTCAAAGAAGATAAGATACCAAGTTCGGAAACTAAACGCTGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACACTGA 654 0.4358 MGCTSLLRSPKKEEQEVPDAFTSLLPNSNQSYTYEDFNILEELEGVFNSKEEQELLQQNSSSGELHWDFMEWEELAPFGEEGEDENEGKEQVTESMSQYPFEEQQIKRENIVGFWEMDDEKMLSLNLNLNYQEVLDAWSNRGSLWADECSLSLATNNSCYNGEVPVLEEERARREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2660 217 Pfam CCT motif 174 216 IPR010402 GO:0005515
Pvu8g2660 217 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 4 217 - -
Pvu8g2660 217 ProSiteProfiles CCT domain profile. 174 216 IPR010402 GO:0005515
Pvu8g2660 217 MobiDBLite consensus disorder prediction 1 29 - -
Pvu8g2660 217 PANTHER CCT MOTIF FAMILY PROTEIN 4 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2660 Pvu-Chr8 57017562 57018978 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2660 118 216 C2C2-CO-like Transcription Factor Family AT1G73870 47.107 6.61e-23 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu8g2660 CCT 2.2e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2660 - - aprc:113847792 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2660 8 57017562 57018978 Pvu8g2660 8 57017562 57018978 ECH