Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2630 ATGGGCAAGGCTTGCGAGCTTTGCAGCAACCGAGCTTCTTTCTATTGTCCCTCCGATTCCGCATTTCTCTGCTGCGACTGCGACGCGGCCGTGCACGCCGCCAACTTCCTCGTCGCGCGCCACTTCCGTCGCCGTATCTGCTCCGAATGCAACCGTTTCACCGGGATCCACATCTCCGGCGCCGCGCTACCGTCCACCTGCACCTCCTGCTCGCCGGAAAAGCCGCCTTCCGACGACGTTGATTCTCTCCCGTCGTCCTCCACCTGCGTCTCCACTTCCGAGTCGTGCGCCGCGGAGAAGATCAAGGCGACGCGCGCGGCGGCGGGGAAGAAGAGGAGGAGGAGTTTCTGGAGTTCCGTCATCGACGACGCGTCTCAGGAAGCGAAGAAAAAGCGGAATAGCGTCGGATCGGTGGAGCTGGAGCAGGAGCAGGAGGAGGTGTTTGGAAAATGGAGCAGAGAGATAGGTTTAGGGTTAGGGTTAGGGTTAGGAGAGAACGGTAACCGCGTGGCCTCGCACGCTCTGAACGTGTGTCTCGGAAAGTGGAATTTGCTTCCGTTCAGGGTGGCTGCGGCGACGTCGTTGTGGCAGGGTCTGAGATTTTGTGGGGACAGGAGTCTGGCCACGTGGCAGAATCTGGCGAGGTTGGAGAAAATCTCCGGAGTGCCAGCTAATCTGATTCTAGCCGCACACGCGAACCTCGCACGTGTCTTCACGCTGCCGCGTGAATTGCACGAGGGATGGGGCGAGTCCTAG 756 0.6019 MGKACELCSNRASFYCPSDSAFLCCDCDAAVHAANFLVARHFRRRICSECNRFTGIHISGAALPSTCTSCSPEKPPSDDVDSLPSSSTCVSTSESCAAEKIKATRAAAGKKRRRSFWSSVIDDASQEAKKKRNSVGSVELEQEQEEVFGKWSREIGLGLGLGLGENGNRVASHALNVCLGKWNLLPFRVAAATSLWQGLRFCGDRSLATWQNLARLEKISGVPANLILAAHANLARVFTLPRELHEGWGES* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2630 251 SMART bboxneu5 1 46 IPR000315 GO:0008270
Pvu8g2630 251 CDD Bbox1_BBX-like 4 46 - -
Pvu8g2630 251 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Pvu8g2630 251 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 237 - -
Pvu8g2630 251 PANTHER B-BOX ZINC FINGER PROTEIN 32-LIKE 2 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2630 Pvu-Chr8 56810922 56812031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2630 1 251 C2C2-CO-like Transcription Factor Family AT3G21150 32.685 2.24e-24 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2630 - - pvu:PHAVU_008G254400g 465.692