Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2616 CACGAAAGGCGCGTGGCAGCCGTTGGTTTAACCCAAAACAGCGCTTCCTATATCAGAGGCATCGGAAAAAAGAATGCTTTCTGCTTCTTCTTCCTTTTCTTCCACACAAATACTTTCTCTCTCTCTCTCTCTTCCTATTCGCACGTACACACGCGCTCTCTCTTCTTTTCCGATTCCACTTTGCGGACACGATTTGAGATGGGGATATATCTCAGCGCTCCCAAAACAGATAAGGCCTCTGAAGATGGCGAGAACGACAAGCTGCGTTTTGGTTTGTCTTCCATGCAGGGTTGGCGTGCTTCCATGGAAGATGCTCATGCAGCTATCCCATATTTGGACCAGACTACATCTTACTTTGGCGTTTATGATGGTCATGGAGGCAAAGCAGTTTCTAAATTCTGTGCCAAGTATCTACACCAGCAGGTGCTGAAGAGTGAACCTTACCAAGCTGGAGATATAAGCACATCTTTACAAAAATCTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGGGATAAAATAGAAAAGTTATCTGGTATGCTAGAGGGCTTTATTTGGTCTCCCAGGAGCAATGAAGCCAATGACGGCGTCGACGATTGGGCATTTGAGGAGGGACCCCATTCTGATTTTACTGGACCAAACTGTGGAAGCACTGCTTGTGTAGCTGTTATCCGAGGAAGCAAACTTATTGTTAGTAATGCTGGAGATTCTAGATGCGTCTTGTCAAGGAAAGGCCAGGCGCACAATTTATCTAAGGATCACAAGCCTGACCTTGAGGCTGAGAAAGACAGGATTCTAAAAGCTGGTGGTTTCATCCAAGTTGGACGGGTCAATGGAAGTTTAAACTTGGCTAGAGCAATTGGAGATATGGAGTTCAAGCAGAATAAGTATTTGCCTGCCGAAAAGCAGATCGTGACTGCTGATCCGGACGTAACTTCAGTTGAACTTTGTGATGATGATGAATTCCTTGTGGTAGCTTGTGATGGAATATGGGATTGCATGTCAAGCCAACAGCTTGTGGACTTTATACATCAACAGTTAAAGACAGAGGACAAACTTTCTGCGGTTTGTGAGAAAGTATTTGATAGGTGCTTGGCACCAACAGCTGGTGGCGAGGGGTGTGATAACATGACCATGATCTTGATTCAGTTCAAAAAACCTTCCAGCCCTAATGTTTCTGTCACGAACCAGCCCCAATCGTCTTCTCAACCACCTGAAACCGATAGAAGTTCAGAGAAAAAAGTAGAACCAAAGTGA 1287 0.4499 HERRVAAVGLTQNSASYIRGIGKKNAFCFFFLFFHTNTFSLSLSSYSHVHTRSLFFSDSTLRTRFEMGIYLSAPKTDKASEDGENDKLRFGLSSMQGWRASMEDAHAAIPYLDQTTSYFGVYDGHGGKAVSKFCAKYLHQQVLKSEPYQAGDISTSLQKSFLRMDEMMRGQRGWRELAVLGDKIEKLSGMLEGFIWSPRSNEANDGVDDWAFEEGPHSDFTGPNCGSTACVAVIRGSKLIVSNAGDSRCVLSRKGQAHNLSKDHKPDLEAEKDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKYLPAEKQIVTADPDVTSVELCDDDEFLVVACDGIWDCMSSQQLVDFIHQQLKTEDKLSAVCEKVFDRCLAPTAGGEGCDNMTMILIQFKKPSSPNVSVTNQPQSSSQPPETDRSSEKKVEPK* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2616 428 PANTHER PROTEIN PHOSPHATASE 2C 64 406 IPR015655 GO:0004722|GO:0006470
Pvu8g2616 428 Gene3D - 66 395 IPR036457 -
Pvu8g2616 428 CDD PP2Cc 89 394 IPR001932 -
Pvu8g2616 428 Pfam Protein phosphatase 2C 89 169 IPR001932 -
Pvu8g2616 428 Pfam Protein phosphatase 2C 222 379 IPR001932 -
Pvu8g2616 428 MobiDBLite consensus disorder prediction 398 416 - -
Pvu8g2616 428 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Pvu8g2616 428 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 64 406 - -
Pvu8g2616 428 MobiDBLite consensus disorder prediction 398 428 - -
Pvu8g2616 428 SUPERFAMILY PP2C-like 69 396 IPR036457 -
Pvu8g2616 428 ProSiteProfiles PPM-type phosphatase domain profile. 89 394 IPR001932 -
Pvu8g2616 428 SMART PP2C_4 79 392 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2616 Pvu-Chr8 56715898 56723961 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2616 67 398 PP2C-type Phosphatase Gene Family AT2G25070 76.577 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2616 K17499 - gmx:100776787 671.003