Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2611 ATGAAAATCAAACTATGGTTGGTCATTGTTGGAGGGTGTTTCAGCTATTCCCTCCTCCGTCTTCGTTCCATTTTAGATCCTCAACCCTTATACCAAGATCTTGCAGGCATTCGCATTGATCCACGATCACAATCACAATCACAAGTAAGCAGTGGAAGTGTTTCTCCACCCGATTCACCCCATGTTCCTGTTCCTCCCCAAGCTGATCCTACCCACCTTGGCTCACCTTTACAACAAGGCAATAATAGTCGTAGAGCTATTGCCAGGATGCATTTTATGAGTTATATAGAAGAACTTGAAAAGGAGAATGAAAAGGTTATCGACACAATTTTGAAGCTTGTGGGTGAATACCTTAAGGCTAATGTTGTGAAGGAAGACCAGATTGCAGTGCCGGAAATACAAGCTGACGACAATTTGGTGAAAGACATGCTACCGGTGGAACTCATCGACAAACTTCGCCAAACCGGGAGGTTGATGTTTCAGAATGAGTGCTGCAGTTTGTACAGCAGTTGTAGGAGGTTGTTTCTCAAGCAGTGTTTATCGAAATTCGGTTTGGAAGTTGAAGAGCTCAAGGTGGAGGACTTTGACAAGATGGAGAAGATAGAGTGTTTGATAAAAGGTCTGAACATAACTGTGAGGATACTGTTTCCCAATGAAAGGATTCTCTGTGATCTCGTGTTCCCACAGTCTTACAATGCAGATATCGCATTCAGTGAGGTTTGCAGTGAACTGAGTATCAGTCTGTTGAGATTTGTGAATACATTAGCAACTGAGAATCATCAATGGTCTTACCATCTGGTCCATGTCATTCCCAACGTGTTCAAGACTTTGATTGACCTCATTCCAATGTTTGATTCACTGTTTTATGGTCAGTTGTTCAGTGAATCACTCAGAAATGGTGCAGTTCTTGTTGGGAAGAGATTGGGTGTTTTTGTTGAGTTGGAGAGTCTTATTCACCGTGAAGTGGCTAAGGAGAGTGTTCCCAATGGTGGGATTCACCCAACTACCCACAAAGTGATTGATTATCTCAGAGAAGTTTTCACAGATGATGAGACTTTCCCAATTAGAAAGGGAGTATCTTCATTTTCAGATCAGGTGGGTAGAATAATAAAAGTGTTAGACTCAAATTTGGAAGCCAACTCTAGAAGCTACACAGACCCAGCATTAGGCCATGTTTTCATGATAAATAATTTGATGTTTTTACAATACGGGGAATACTATATATATGGAGACATTTTAGGCCAAGATTGGTACAAATCAAAGATCAACCAGAACATTGAACTCTATCAAAGAAGCTCGTGTGACAAGATATTGGACCTTTTGAAAGTAAACAGAAGGGAGTTGGTAGCAGAGTCTATGAAAAAGAAGCTCAAATTGTTCAACCAGCACTTCAATGAGATATGCAAAGCTCAGTCTGAATGGTTTATCTTTGATGATCAGCTAAGGGAACGTATGATAAAATCCATAGAGAACACATTGTTGCCTGCATATGGAACCTTCATTGGAATGATTCATGATGTTGTTGGTAAGGATGCTTATAAGTTCATTAGGTATGGAATGCATAACATTCAAGATCGCCTGAGCCGTTTGTTTCTTGTAACCAATGCATGA 1611 0.4053 MKIKLWLVIVGGCFSYSLLRLRSILDPQPLYQDLAGIRIDPRSQSQSQVSSGSVSPPDSPHVPVPPQADPTHLGSPLQQGNNSRRAIARMHFMSYIEELEKENEKVIDTILKLVGEYLKANVVKEDQIAVPEIQADDNLVKDMLPVELIDKLRQTGRLMFQNECCSLYSSCRRLFLKQCLSKFGLEVEELKVEDFDKMEKIECLIKGLNITVRILFPNERILCDLVFPQSYNADIAFSEVCSELSISLLRFVNTLATENHQWSYHLVHVIPNVFKTLIDLIPMFDSLFYGQLFSESLRNGAVLVGKRLGVFVELESLIHREVAKESVPNGGIHPTTHKVIDYLREVFTDDETFPIRKGVSSFSDQVGRIIKVLDSNLEANSRSYTDPALGHVFMINNLMFLQYGEYYIYGDILGQDWYKSKINQNIELYQRSSCDKILDLLKVNRRELVAESMKKKLKLFNQHFNEICKAQSEWFIFDDQLRERMIKSIENTLLPAYGTFIGMIHDVVGKDAYKFIRYGMHNIQDRLSRLFLVTNA* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2611 536 Pfam Exo70 exocyst complex subunit 205 528 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pvu8g2611 536 PANTHER PROTEIN, PUTATIVE-RELATED 117 532 - -
Pvu8g2611 536 SUPERFAMILY Cullin repeat-like 106 531 IPR016159 -
Pvu8g2611 536 MobiDBLite consensus disorder prediction 45 80 - -
Pvu8g2611 536 Coils Coil 96 116 - -
Pvu8g2611 536 Gene3D Exocyst complex component Exo70 78 535 - -
Pvu8g2611 536 PANTHER EXOCYST COMPLEX PROTEIN EXO70 117 532 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2611 Pvu-Chr8 56670642 56672252 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2611 127 535 EXO70 exocyst subunit family AT5G58430 40.090 4.69e-85 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2611 - - pvu:PHAVU_008G252500g 1040.41