Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2609 ATGCTCATGCTCATCAAAATTCAGAGTTGGCTGCATCAGCCAAAGGTATGGAGATTTGTGTGTTTTGTTTCATCTATTGTTGGACTTGTGTGTTATGCTTTCTGCTCCTCTTTCAATCATTTACTTGGAAATTGGACCTGGTGGAAGATCTTTCTTTATATTGTTTTCAGTTTCTTAATCTCCCTTTCCACCTTGTTTGCAAAGACATGGGAATACTTCAACTATCGCTGTTTGGAAGCTCACACAGCATTTTCTACTTTGCTGCTAACTTCTGTATACTCCTTTTTCCTTGATAAAGATGTGAAAGAGAAACTAGATGCATATAGTCTGGTTTCGTGTGTTGCATTTGCTATCATGTCTCTAGGCTTGTCAAGGTTGAGTCACTTAGGATTTGAGGTTGATCTCCTGTATTTTTTCAGTGGACTTCTGACATATTCTCTCATCCTTCTTCGTTCCACTTTGGATCCTCAACCAAGAAGTGGGTATCATGGACTTCCACACCAGGATCATGTAGTGGTTGAAATGGGTTTGCATTCACAACCACAAGGAACCAGTCCTAGTGTTACTCTAGTGGATTCACCCCAAACAGTTGTCACTCGTACAGGTAATGCTTGTTCACAACCACACCCAGGTGGTGCTCCTCAAGGAAACATTGATGGTACCATGGCATGCTTAATGGGTTGTATAGAGGCTCTTAAGAAGGAGAATGGGAGCGTTATCAGCACAATTTCCAAGCATGTAGACAAATACCTTAAAGCTAATGTTCTAGTTGAGGATCAGATTTCAGTGTCAGAACTGTATTGCGACGACAACATGTTGTTGGATTCATTGTCCCCAGGAATGATCAGCAACCTTCGTGAAAGTGTACAGAAGATGTTTTCAGATGGACTTGAGAAGGAATGCTTACACAGTCTATGGTCATTAGGGTTGCCAGATCAAGAGCTCAACATGGAGGACATTAACAAGATGGAGAAGATTGAGAGCTTGATAAAAGGTATGAACATAGCTGCAAGGATTATCTTTCCCAATGAGAGGAGATTCTTCAATCTTGTCTTTAGCGGTTCCCTTTCCTCTTGTGAGATGATTGAGCTTTTAGAGAGCAGTTTGGAAGCCAACTCCAAAAATTACAAAAACCCTACTTTGGGTTATGTTTTCATCATGAACAACCGGAGATTTATAGGAGTAGAGGCAAAACTGAAGGAACTGGGACCTATTCTTGGAGATGACTGGCTCCACAAAAACACAGAAAAATTCCAACAAAACCTTGAACTCTATCTAAGAAGCTCATGGAATAAGATTGTGAACCTTTTGAAGCTAGACATCAATCAACTAGAGCCTAGTGTTGCCGCCGAGTTGATGAAAGACAAGCTTTTTTGGTTCAACGAACACTTTGATGAGACATGCAACATTCAGTCTGAATGGTCTGTCTGTGATGCGGAGCTAAGGGAGCAAATAATAAAATCCATAGAAAACATCCTGTTGCCAGCATATGGAAGCTTCATTGAGAGATTTGAGAAATTTCTTGGGAAGAATGCTTATAAGGACATTAAGTATGGAATAGGTGAGGTTCAAGATCAACTCAAAAATTTGTTTCTTATAAGAGAGTAG 1608 0.4024 MLMLIKIQSWLHQPKVWRFVCFVSSIVGLVCYAFCSSFNHLLGNWTWWKIFLYIVFSFLISLSTLFAKTWEYFNYRCLEAHTAFSTLLLTSVYSFFLDKDVKEKLDAYSLVSCVAFAIMSLGLSRLSHLGFEVDLLYFFSGLLTYSLILLRSTLDPQPRSGYHGLPHQDHVVVEMGLHSQPQGTSPSVTLVDSPQTVVTRTGNACSQPHPGGAPQGNIDGTMACLMGCIEALKKENGSVISTISKHVDKYLKANVLVEDQISVSELYCDDNMLLDSLSPGMISNLRESVQKMFSDGLEKECLHSLWSLGLPDQELNMEDINKMEKIESLIKGMNIAARIIFPNERRFFNLVFSGSLSSCEMIELLESSLEANSKNYKNPTLGYVFIMNNRRFIGVEAKLKELGPILGDDWLHKNTEKFQQNLELYLRSSWNKIVNLLKLDINQLEPSVAAELMKDKLFWFNEHFDETCNIQSEWSVCDAELREQIIKSIENILLPAYGSFIERFEKFLGKNAYKDIKYGIGEVQDQLKNLFLIRE* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2609 535 PANTHER EXOCYST COMPLEX PROTEIN EXO70 8 354 IPR004140 GO:0000145|GO:0006887
Pvu8g2609 535 PANTHER EXOCYST COMPLEX PROTEIN EXO70 360 532 IPR004140 GO:0000145|GO:0006887
Pvu8g2609 535 SUPERFAMILY Cullin repeat-like 359 531 IPR016159 -
Pvu8g2609 535 Pfam Exo70 exocyst complex subunit 360 528 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pvu8g2609 535 Gene3D Exocyst complex component Exo70 358 534 - -
Pvu8g2609 535 Gene3D Exocyst complex component Exo70 214 357 - -
Pvu8g2609 535 PANTHER PROTEIN, PUTATIVE-RELATED 8 354 - -
Pvu8g2609 535 PANTHER PROTEIN, PUTATIVE-RELATED 360 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2609 Pvu-Chr8 56662585 56664841 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2609 361 531 EXO70 exocyst subunit family AT5G58430 46.821 2.25e-35 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2609 - - pvu:PHAVU_008G252300g 1083.17