Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2604 ATGTCTCTCCGAAATTTCAATCCTCTAGAACAGAAAAGTCTATGCAGAGTTGTGGGGTTTATCTCCAGTGTGATTGGACTTATCTGTTATGCGTTTAGTTCCTCTTTCAACCATCTATTTGGAGAGTGGAACTTCTTGAAGATCATCCTTTACACCATGGTAAGCTTCTCTATCAGCGGTATCATGTTATTTCTGAAGAAATGGAAACGTTCCGGTCGTTTCTCGCCGAAAGTTCACGCGGGTGTTCTGGTTTTGTTGCTCACTTCTTTCTACTCTTTCGTGTATGATAAATCTGTGAATGGAAAACCAAACGGATTAAGTTTGATTTCGTGTGGAGCCTTTGCTTTGATGTCTTTGTGTCTTTCAAGGCAGATCGACCTAGGGTTTGAAGCAGATCTCCTCAATTTCTTCCTTGGAAGTCTAACTGTTCAACTCATGGAGATCAATTTGATGCTCTTTATTGTCGCAGCGATCTTGTGCTATTGTTTCATGATTCTTCGTTCTAAAGAGTCTGAGTCTGAGATTGGAACAGTACCAATGGAAGACCACGTGACCATAGAACTTGGTACTGCATATGGTGGAGAAAGAGGAGCCGATGACCAACAAATTCCGTTATTGAGAATGGTAGGAGAAGGGTACAACTGGAAAAAATGTGAAGATAAAACAGGGAAAGGGAATGAAAATCAAGTAAGTTACTATAAATGCACACACCCCAATTGTTATGTGAATAAAAAAGTTGTTAGAACTATAGATGGGAAAATTGTTGAGATACATTACCAGGGTAACCATGCACATTGCAAGCGTCTGAATAACATGAAGAGGAACTCTTCATCTGAATATTTATACTCACTGCTAACTTCAGACTCTGTCACCACTGAATCATTTGCCTCCCAGAGCAACCAACAATTGGATTATGATGTGCACTTCAGGAGAACTCATCAGTATCCACATGAAATATAA 960 0.3979 MSLRNFNPLEQKSLCRVVGFISSVIGLICYAFSSSFNHLFGEWNFLKIILYTMVSFSISGIMLFLKKWKRSGRFSPKVHAGVLVLLLTSFYSFVYDKSVNGKPNGLSLISCGAFALMSLCLSRQIDLGFEADLLNFFLGSLTVQLMEINLMLFIVAAILCYCFMILRSKESESEIGTVPMEDHVTIELGTAYGGERGADDQQIPLLRMVGEGYNWKKCEDKTGKGNENQVSYYKCTHPNCYVNKKVVRTIDGKIVEIHYQGNHAHCKRLNNMKRNSSSEYLYSLLTSDSVTTESFASQSNQQLDYDVHFRRTHQYPHEI* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2604 319 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 268 IPR044810 GO:0003700
Pvu8g2604 319 SUPERFAMILY WRKY DNA-binding domain 208 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g2604 319 SMART WRKY_cls 209 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g2604 319 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 10 268 - -
Pvu8g2604 319 ProSiteProfiles WRKY domain profile. 204 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g2604 319 Gene3D WRKY domain 205 267 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g2604 319 Pfam WRKY DNA -binding domain 211 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2604 Pvu-Chr8 56635386 56639980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2604 207 303 WRKY Transcription Factor Family AT2G03340 42.000 3.07e-16 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu8g2604 WRKY 2.2e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2604 - - gmx:102667674 437.187