Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2575 ATGGAGAACAAATCAAGAATCTTGATGCAAAAATATGAACTAGGAAGGTTACTAGGCAAAGGAACGTTTGGAAAAGTCTACTATGGCCGTAGTACAGTAACTAACCAAAGTGTGGCCATTAAAGTGATTGACAAGAATAAAGTTATAAGAACTGGGCAGGCTGATCTCATTAAAAGGGAAATATCTATTATGAGACTGGTCAAGCACCCAAATGTTATTGAGCTTTTTGAGGTCATGGCCACGAAGAGTAAGATTTACTTTGTTATGGAATATGCTAAGGGAGGAGAACTGTTTAAGAAGGTGGCCAAAGGAAAGCTCAAAGAAGATGTTGCACACAAGTATTTTCGGCAGCTAGTGAATGCAGTGGATTTTTGTCACAGTAGAGGTGTGTGCCATAGAGATATAAAGCCAGAGAACATTTTGTTGGATGAAAATGATAATTTGAAGATCTCTGATTTCGGGTTAAGTGCCCTGGCTGAATCCAAACACCAAGACGGCTTGTTGCACACAGCTTGTGGAACACCTGCCTATGTTGCTCCTGAGGTCATCAAAAGGAAAGGTTACGATGGTGCCAAAGCTGACATTTGGTCATGTGGGGTAGTTTTGTTTGTCTTACTAGCAGGTTACTTTCCTTTTCAAGATCCTAATTTGATGGTGATGTATAGGAAGATAAGCAAGGCAGAGTTTACATGCCCTAGATGGTTTCCAGCAGGAGTTCGGAGGCTATTGAGCAAGATGTTGGATCCAAATCCAAACACTAGGATTTCCATGGATAAGATTAAGCAATGTTCTTGGTTTATGAAGTGGCCAAATGGTAGACAGACAACACAAGAAGGGGAAAACAGGAGTGTCTCTCCTTCAATTACAAATCATTCTGAACAATGTGGTGATGGAAGTAATGGTTTAGCAGCAGAAGCAAGGAAAGAGTCAGCTGTGCCAGTAAGTATAAATGCCTTCGACATAATCTCCCTTTCACCTGGGTTTAATCTTTGTGGATTCTTTGAAGACAGCTTTCAGAAAAGGGAAGCAAGATTTACTTCAAGACAACCAGCATCTGTCATCATCTTCAGGCTGGAAGAAATGGCCAATGGGCTGAAGATGAAAATAAAGAAAAGGGCTGCCGGTTTGTTGAAAATGGAGGGCCTTCATGAAGGTAGGAAGGGGATCTTATCCATTGATGCAGAGATCTTCGAGATTACTCCACTTCTGCACTTGGTGGAGGTGAAGAAATCAAATGGAGATACGCTGGAATATGAGAAAATACTAAAAGAAGCCATAAGGCCTGCTCTTAAAGATATTGTTTGGGTATGGCAAGGTGACCAACAACAGTAA 1332 0.4107 MENKSRILMQKYELGRLLGKGTFGKVYYGRSTVTNQSVAIKVIDKNKVIRTGQADLIKREISIMRLVKHPNVIELFEVMATKSKIYFVMEYAKGGELFKKVAKGKLKEDVAHKYFRQLVNAVDFCHSRGVCHRDIKPENILLDENDNLKISDFGLSALAESKHQDGLLHTACGTPAYVAPEVIKRKGYDGAKADIWSCGVVLFVLLAGYFPFQDPNLMVMYRKISKAEFTCPRWFPAGVRRLLSKMLDPNPNTRISMDKIKQCSWFMKWPNGRQTTQEGENRSVSPSITNHSEQCGDGSNGLAAEARKESAVPVSINAFDIISLSPGFNLCGFFEDSFQKREARFTSRQPASVIIFRLEEMANGLKMKIKKRAAGLLKMEGLHEGRKGILSIDAEIFEITPLLHLVEVKKSNGDTLEYEKILKEAIRPALKDIVWVWQGDQQQ* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2575 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pvu8g2575 443 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2575 443 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2575 443 PANTHER - 2 442 - -
Pvu8g2575 443 CDD CIPK_C 317 431 - -
Pvu8g2575 443 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 442 - -
Pvu8g2575 443 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Pvu8g2575 443 SUPERFAMILY Protein kinase-like (PK-like) 8 284 IPR011009 -
Pvu8g2575 443 MobiDBLite consensus disorder prediction 273 302 - -
Pvu8g2575 443 MobiDBLite consensus disorder prediction 273 297 - -
Pvu8g2575 443 Gene3D Transferase(Phosphotransferase) domain 1 2 313 - -
Pvu8g2575 443 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Pvu8g2575 443 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2575 443 Pfam NAF domain 313 371 IPR004041 GO:0007165
Pvu8g2575 443 Gene3D Kinase associated domain 1, KA1 314 436 - -
Pvu8g2575 443 CDD STKc_SnRK3 11 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2575 Pvu-Chr8 56373301 56374632 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2575 1 443 CBL-interacting serine-threonine protein kinases AT5G58380 64.758 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu8g2575 Pkinase 1.5e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2575 - K07198 gmx:100779316 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0797 6 19523381 19524769 Pvu8g2575 8 56373301 56374632 PCT