Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2574 ATGCCGGAAATTGAACAGGCGGCGGCGGAGAGCGCCGTCCTGTTCGGAAAATACGAGGTGGGAAGGCTCCTAGGATGCGGCGCGTTCGCAAAGGTGTACCACGCGCGTAACACCGAAACGGGGCAGAGCGTGGCAGTGAAAGTCGTAAGCAAGAAGAAACTAGCCGCAACGGGGATGGCCACCAACGTGAAGCGCGAGATTGCCATTATGAGCCGTCTTCACCACCCCAACATCGTGAAACTCCACGAGGTGTTGGCGACCAAGACAAAAATCTACTTCATCTTGGAATTCGCGAAAGGCGGCGAGCTCTTCGCGAGAATCGCGAAAAATCGATTCAGCGAAGATCTTGCGCGGCGGTTCTTCCAGCAGTTGATCTCCGCCGTCGGGTACTGCCATGCGCGCGGCGTGTTCCACCGCGACTTGAAGCCGGAGAATCTACTGCTGGACGAGCAGGGGAACCTTAAAGTCTCCGACTTTGGACTCGGCGCGGTGAAGGAGCAGATAGGGCTGGATGGGAGGCTGCACACGCTATGTGGGACCCCTGCTTACGTGGCACCGGAGATTTTGGCGAAGAAGGGTTACGACGGGGCTAATGTTGATGTTTGGTCTTGTGGGGTAATTCTCTTTGTTCTTGTGGCTGGGTATCTACCCTTCAATGACCCAAATCTTATGGTGATGTATAGAAAGATTTACAAGGGGGAGTTTCGGTGTCCGAGGTGGTTTTCGATGGAGTTGAGGAGGTTTCTGGCGAGATTGTTGGATACAAATCCCGAGACGAGGATAACCATTGACGAGATATTGAAGGAGGCGTGGTTCAAAAAGGGGTACAGGGAGGTTACTTTTGGCGATTTAGGGTTGGAGTGGAAGAGTGAAGGTGATGGGGTGAAGGATTTGAACGCGTTTGATATAATTTCTTTCTCCTCAGGCTTGAATCTCTCCGGTTTGTTTGATTCGGTGAAAGGGGTGGAAGAGGGAGAGAGGTTTATGCTGAAGGACTCGCCGGAGAAGGTGGTGGAGAAGGTATTGGCGGCGGCTGCTACTGTCGAGGGTATTGTCGTACGCACGAGGAAGGAGTGTGGGGTGGAGTTGGAGGGGTGTAATGGTGATTTCGCCGCTTTGGTGGAAGTTTACCGGTTATCGGCGGAACTGGTTGTGGTTGAGGTGAGAAGGAGGGATGGTAATAGCGGAGTTTTTAGGGATGTGTGGAGGAATAAGCTCAGGCCGTTTCTCTGCGCTGCCAGTAGCAGTACGACGTCGGATCGGGAGGAAACTGAAGATAAATGA 1284 0.5312 MPEIEQAAAESAVLFGKYEVGRLLGCGAFAKVYHARNTETGQSVAVKVVSKKKLAATGMATNVKREIAIMSRLHHPNIVKLHEVLATKTKIYFILEFAKGGELFARIAKNRFSEDLARRFFQQLISAVGYCHARGVFHRDLKPENLLLDEQGNLKVSDFGLGAVKEQIGLDGRLHTLCGTPAYVAPEILAKKGYDGANVDVWSCGVILFVLVAGYLPFNDPNLMVMYRKIYKGEFRCPRWFSMELRRFLARLLDTNPETRITIDEILKEAWFKKGYREVTFGDLGLEWKSEGDGVKDLNAFDIISFSSGLNLSGLFDSVKGVEEGERFMLKDSPEKVVEKVLAAAATVEGIVVRTRKECGVELEGCNGDFAALVEVYRLSAELVVVEVRRRDGNSGVFRDVWRNKLRPFLCAASSSTTSDREETEDK* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2574 427 Gene3D Kinase associated domain 1, KA1 293 413 - -
Pvu8g2574 427 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 421 - -
Pvu8g2574 427 SUPERFAMILY Protein kinase-like (PK-like) 14 279 IPR011009 -
Pvu8g2574 427 PANTHER - 1 421 - -
Pvu8g2574 427 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2574 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Pvu8g2574 427 Gene3D Transferase(Phosphotransferase) domain 1 8 292 - -
Pvu8g2574 427 ProSiteProfiles NAF domain profile. 293 317 IPR018451 GO:0007165
Pvu8g2574 427 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2574 427 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Pvu8g2574 427 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2574 427 Pfam NAF domain 297 347 IPR004041 GO:0007165
Pvu8g2574 427 CDD CIPK_C 299 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2574 Pvu-Chr8 56362860 56365275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2574 1 419 CBL-interacting serine-threonine protein kinases AT2G30360 61.751 0.0 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu8g2574 Pkinase 9.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2574 - K12761 gmx:100815088 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0801 6 19545613 19548315 Pvu8g2574 8 56362860 56365275 PCT