Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2569 ATGGGGAACAACAGGTTTAAGTTGTCAGATATGATGCCAAATGCTTGGTTTTACAAGCTCAAAGATATGAGCAGATCAAGAAAGAGAAATGGTTCTCATGTTATGAAGAGTAAAGTATCTTCACCAACATCTCAAAGGTCGCTGCCAAGATATTCACACTATTTCTCCTCTGAGCCAATCAGAGCTGGTAAGCTATACAACACTCCCATTCACACCAGAGACTTGGACATGCCATTCACTGATTCACCTAGAAGGTCAGCCAAGAGAAGGACAAGGAGAAAAACCATTTACAAGCCTTCTCCCACTGTTGTTTCTTCGTCTTTCATACCAACTTCCAACTACGACTCCACTAATCATTGGATCAAACCATACCAAGTTCAGTCACCAGATTATGATGTGTCTACAGTTGAAAGCTCTTCTGAATCTGATCTCCATGAATATGCCTATTCTGAGTCTGAATGTGACAGTTTTCCTGTTCCTGATTTACTTAATGGAATGGCCTCTAATGGCAGCTGCAGAGTTAGCTCTTCCACTAATGACATCATCATTGACATGAACAACGAGTCCTTCCTTGGGAACTCTGAAAACCAAGATGGGTTTGATGCAATTTCACAGCTAGGTCTTGCTCCAATATTGACGAAGCCAGTGAAGTTTGATGACAAGGTCATTGAAGCCAATGAGTTGAGAAGTTCAACTGAATGGGATGAGCTGCAGGATGATCAGTCTTTCTCAATTGAAATTAACCAAGAGGAAGGCAATAGAACTCAAAGGAGGAGAAAAAGCAGTCATAGAAAGCCCTTCACTAATTCTTCTGGCATAAGGCTTAGAATCAATTCTCCAAAACTTGCTAGCAGAAAAATTCAAGCCTGTGCAAGAAGGAGTGTGTCATCCACTGCAAGCAGAGCTTCAAGGGGTACAAGCTTTCCCGATGGCTTTGCTGTTGTGAAGTCCTCATTTGATCCACAGAGTGACTTCAGGGAGTCAATGGTGGAGATGATTGTGGAGAACAACATCCGAGCATCGAAAGATTTGGAGGACCTACTTGCCTGCTACCTTTCCCTCAATTCAAGTGAATACCATGATCTCATTGTTAAAGCATTTGAGCAAATTTGGTTTGACTTGGCTCAACTTAGAATGTAA 1140 0.4184 MGNNRFKLSDMMPNAWFYKLKDMSRSRKRNGSHVMKSKVSSPTSQRSLPRYSHYFSSEPIRAGKLYNTPIHTRDLDMPFTDSPRRSAKRRTRRKTIYKPSPTVVSSSFIPTSNYDSTNHWIKPYQVQSPDYDVSTVESSSESDLHEYAYSESECDSFPVPDLLNGMASNGSCRVSSSTNDIIIDMNNESFLGNSENQDGFDAISQLGLAPILTKPVKFDDKVIEANELRSSTEWDELQDDQSFSIEINQEEGNRTQRRRKSSHRKPFTNSSGIRLRINSPKLASRKIQACARRSVSSTASRASRGTSFPDGFAVVKSSFDPQSDFRESMVEMIVENNIRASKDLEDLLACYLSLNSSEYHDLIVKAFEQIWFDLAQLRM* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2569 379 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 378 IPR038933 GO:0045892
Pvu8g2569 379 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 378 - -
Pvu8g2569 379 MobiDBLite consensus disorder prediction 233 272 - -
Pvu8g2569 379 ProSiteProfiles OVATE domain profile. 314 373 IPR006458 -
Pvu8g2569 379 MobiDBLite consensus disorder prediction 27 48 - -
Pvu8g2569 379 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Pvu8g2569 379 Pfam Transcriptional repressor, ovate 318 374 IPR006458 -
Pvu8g2569 379 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 312 375 IPR006458 -
Pvu8g2569 379 MobiDBLite consensus disorder prediction 74 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2569 Pvu-Chr8 56312377 56313516 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pvu8g2569 Ovate 3.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2569 - - gmx:100780926 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0805 6 19571948 19573395 Pvu8g2569 8 56312377 56313516 PCT