Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2568 ATGGCACAACATTGTTATGTGGAAACCGACCCAACTGGTCGCTATGGCAGGTTTGGAGATGTTCTTGGAAAAGGGGCAATGAAGACTGTGTACAAAGCAATTGATGAGGTTCTTGGAATTGAGGTAGCATGGAACCAAGTCAGACTCAATGAGGCACTTCGCACCCCGGAAGATTTGCAGAGGCTTTACTCAGAGGTTCATCTCCTCAGTACCCTCAAGCATCAGTCCATCATAAGATTCTACACTTCTTGGATTGATGTTGATAACAGGGCCTTCAACTTTATCACAGAATTGTTCACATCAGGGTCCCTTAGAGAATACAGGAAGAAATATGAGCGTGTCAGCATACAAGGTATAAAGAATTGGGCTCGGCAAATCTTACAAGGTCTTGTTTATCTACATGGCCATGATCCACCAGTGATCCACAGGGACCTTAAATGTGATAACATATTTGTCAATGGTCATCTTGGACAAGTAAAAATTGGTGACCTGGGACTTGCTGCAATTCTTCGTGGATCCCAATCAGCACACAGTGTCATAGGTACCCCTGAGTTCATGGCACCAGAATTGTACGAGGAAGAATACAATGAACTTGCTGATGTGTACTCATTTGGCATGTGTGTGTTGGAAATGCTTACATCTGAATATCCATATAGTGAATGTTCTAATCCAGCACAAATCTACAAGAAAGTGACATCGGGAAAACTACCAATGGCGTTTTTCCGCATTGAAGACATGGAAGCACAAAGGTTTATTGGAAAATGCTTGCTACCTGCAGAAAAGAGGCCTTCGGCAAAAGATTTGTTGCTTGACCCGTTTCTTGCATCTGATGATCCATCATCAGCAACGAAATATGCAATTCAGAAGCCATTTTTAAATGCCACTGAGATGGAGAAGCTACAATTAAACGATGATCTTCCGAGGACTGGAATGAAAGTGATAGGAAAACTGAATCCTGAAGATGATACTATCTTTCTCAAAGTACAAATTTCTGATAAGAATGGTTCTGCTAGGAATGTATTTTTTCCCTTTGACATTTTCAATGACACTCCTATTGATGTTGCAACTGAGATGGTGAAAGAGTTGGAGATTGCTGATTGGGAACCTTTTGAGATTGCAAATATGATTGATAGAGAGATATCTGCTCTGCTACCCCAGAGGAGGCAAAGTAGCTGTTTAGATGCCTTCCACACATTCAGTTACATAGATGATGATTGTGATGACAATGATGCACCTCATCATCATTTCCGCTCGTTCTCTTCAAGTTCATCATTCCAAGAATCAATGCCAGATTTTGTCAGTAAAGCTGAGGAAATGTCAAGTGGATATTATTGGCTCCATGATGATTCGCATGACGATACTAGTTCACGATGCTCTTCACAGGGGACATATTCCAACTTGAATTACTCTTCTGTGGATGATCATCAAGATCAGTACAATCTGCCTTCTTTGAGAAAAGATAAACTTCCCATCATAAAGAGTCACAGCAAGGGCAAAAAGGTTTCCCCTGGCGAAGACTTGAGCAATTTCAACCAATATAAACTCATGGCAGGATCACAGGTTCCTTTTACCAGTAGAAGTAAGATGATGATGAATAATCACAGATTAACAAGGAACAGGTCATTGATTGATATAAGGAGCCAACTGTTACACCGATCACTGGTTGAGGAGGTCAACAAAAGAAGGTTGTTCAATACAGTTGGTGCTGTGGAAAATATTGGATTTCAGGCACCTTGTGATGTTACCACAAAAAGGTCACATCATGTATCTGCTGCTCCAAATGAGAACTCTCCAAGGAGGGGCAAGGGGGAAAAAAGTAAGAGATGA 1827 0.4122 MAQHCYVETDPTGRYGRFGDVLGKGAMKTVYKAIDEVLGIEVAWNQVRLNEALRTPEDLQRLYSEVHLLSTLKHQSIIRFYTSWIDVDNRAFNFITELFTSGSLREYRKKYERVSIQGIKNWARQILQGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEEYNELADVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPMAFFRIEDMEAQRFIGKCLLPAEKRPSAKDLLLDPFLASDDPSSATKYAIQKPFLNATEMEKLQLNDDLPRTGMKVIGKLNPEDDTIFLKVQISDKNGSARNVFFPFDIFNDTPIDVATEMVKELEIADWEPFEIANMIDREISALLPQRRQSSCLDAFHTFSYIDDDCDDNDAPHHHFRSFSSSSSFQESMPDFVSKAEEMSSGYYWLHDDSHDDTSSRCSSQGTYSNLNYSSVDDHQDQYNLPSLRKDKLPIIKSHSKGKKVSPGEDLSNFNQYKLMAGSQVPFTSRSKMMMNNHRLTRNRSLIDIRSQLLHRSLVEEVNKRRLFNTVGAVENIGFQAPCDVTTKRSHHVSAAPNENSPRRGKGEKSKR* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2568 608 CDD STKc_WNK 14 274 - -
Pvu8g2568 608 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 3 601 - -
Pvu8g2568 608 ProSiteProfiles Protein kinase domain profile. 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2568 608 SMART serkin_6 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2568 608 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Pvu8g2568 608 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 3 601 - -
Pvu8g2568 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Pvu8g2568 608 Gene3D - 317 391 - -
Pvu8g2568 608 Gene3D Transferase(Phosphotransferase) domain 1 99 281 - -
Pvu8g2568 608 MobiDBLite consensus disorder prediction 584 608 - -
Pvu8g2568 608 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2568 608 SUPERFAMILY Protein kinase-like (PK-like) 17 305 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2568 Pvu-Chr8 56305123 56310513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2568 6 584 MAP Kinase Kinase Kinase AT5G58350 60.206 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pvu8g2568 Pkinase 6.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2568 K08867 - gmx:100272203 1065.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0806 6 19580077 19585087 Pvu8g2568 8 56305123 56310513 PCT