Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2564 ATGCAAGATCCATCTTCAAACCCTAATTCCAATCCCAATCCTCACAATGCCAATGCCGCATCCCAGCCACCGCGACCATCGCCGTCCACGGCGGCAACCACCGCTGGCGCCTCCTCATCCTCGATTTTCCCACGCTCCGGTGGGACTCACCACCGGCGAGCACACTCGGAGGTGAGTTTCCGGCTTCCGGACGACATGATGGACCTTTCGCCGTCGGATCCGTTTGCCGGCGGGTCGTCGACGGCGAGCATGGAGGAGATCGGATCCGAGGATGACCTGTTCTCAACGTACATTGACGTGGACAAGCTGGGAGGTGCAAACGGGTCGGGCGCTGCGGGAAACGGAGTGGATCCGACCGGAGATCGGGAGAAGAGTCCGGCGAGGGCGCGGCACCGGCACAGTAGTTCCGTCGATGACTCTTCGTTCGGAGAAATTATGGAAGCGAAGAAAGCTATGCCTCCTGATAAGTTAGCTGAGCTATGGACAGTTGATCCCAAGCGTGCTAAGAGAATACTTGCAAATCGGCAATCTGCTGCTCGATCTAAAGAGAGAAAAGCTCGCTATATACAAGAACTCGAGCGTAAGGTTCAAACACTTCAGACGGAAGCCACGACTCTTTCTGCCCAATTGACATTATACCAGAGGGACACAACAGGCCTGAGTACTGAAAATACAGAGCTTAAGCTTCGTCTGCAAGCCATGGAGCAGCAGGCACAGCTTCGTGATGCTCTTAATGAAGCATTGAAAAAGGAAGTTGAGAGACTTAAACTTGCTACTGGTGAGATGATGAGCCACACTGAATCCTTTAATTTGGGAATGCACCATATTCCGTTTACAGGATCAACTTTCAGTCCAATCCTGTCACAATCAGGTCCTTCTGGTCACCAGAACATCCACTTATCATTTGGTCACTCCCCGTCCACAATGCCAACTCATCAACTGCATCAAACAAGTTCTCATCCACTATCAGAAATATTGCAAAATGACCAGCTCGGTCGTTTCCAGGGGCTTGACATTAGTAGCAAAGGATCAACTGTGGTGAAGTCTGAAGGCCCCTCACTTTCTGCAAGTGAGAGTAGCACGACATTTTGA 1092 0.5147 MQDPSSNPNSNPNPHNANAASQPPRPSPSTAATTAGASSSSIFPRSGGTHHRRAHSEVSFRLPDDMMDLSPSDPFAGGSSTASMEEIGSEDDLFSTYIDVDKLGGANGSGAAGNGVDPTGDREKSPARARHRHSSSVDDSSFGEIMEAKKAMPPDKLAELWTVDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKLATGEMMSHTESFNLGMHHIPFTGSTFSPILSQSGPSGHQNIHLSFGHSPSTMPTHQLHQTSSHPLSEILQNDQLGRFQGLDISSKGSTVVKSEGPSLSASESSTTF* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2564 363 SUPERFAMILY Leucine zipper domain 166 217 IPR046347 GO:0003700|GO:0006355
Pvu8g2564 363 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 164 227 IPR004827 GO:0003700|GO:0006355
Pvu8g2564 363 Gene3D - 165 217 - -
Pvu8g2564 363 Coils Coil 182 209 - -
Pvu8g2564 363 MobiDBLite consensus disorder prediction 1 144 - -
Pvu8g2564 363 Pfam bZIP transcription factor 166 221 IPR004827 GO:0003700|GO:0006355
Pvu8g2564 363 MobiDBLite consensus disorder prediction 288 320 - -
Pvu8g2564 363 Coils Coil 230 261 - -
Pvu8g2564 363 MobiDBLite consensus disorder prediction 1 46 - -
Pvu8g2564 363 CDD bZIP_plant_RF2 167 216 IPR044759 GO:0003700|GO:0006355
Pvu8g2564 363 PANTHER ATBZIP TRANSCRIPTION FACTOR 2 360 - -
Pvu8g2564 363 MobiDBLite consensus disorder prediction 121 144 - -
Pvu8g2564 363 MobiDBLite consensus disorder prediction 343 363 - -
Pvu8g2564 363 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 2 360 - -
Pvu8g2564 363 SMART brlzneu 162 226 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2564 Pvu-Chr8 56251904 56255195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2564 1 363 bZIP Transcription Factor Family AT2G40620 49.048 7.71e-106 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu8g2564 bZIP_1 5.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2564 - - vra:106763153 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2564 8 56251904 56255195 Pvu8g2564 8 56251904 56255195 ECH
Pvu6g0821 6 19712402 19715927 Pvu8g2564 8 56251904 56255195 PCT