Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2559 ATGGAGGACTTTTTTCTTTCCATTGCAACAAAGATTGTAGAATATGCAGTATTTCCAATTTTAGACCATGCTCAATACTTGTGTTGTTTCCACAACTTTGCTTCGAATCTTCCAAATGTCAAAGAACAACTGGAATTGACTCGAGAGAGTGTGAATAAGCGAATTAGAGAAATCACTAATAAGACTGAAAAAATTGAGCCACCTGTAGAGAAGTGGTTGAAAGATGTTGAGAGAGTCTTAGAGGAAGTGAGACTACTAGAACAGAGAATATTGAATGTAAACAAGAGCTATTTGAGAAGGCAATGTCAATATTCTCTTGCAAAAGAAATAGCAAGAAAAACAACTAAAATGATTCAGCTTAATCGTGATAGCAAGTTTGAACCGTTTTCTACGATTATTGAACTTCCAGGCATGAAGTACTATTCTTCCAATGATTTTGTTATGTTCCAATCTGCAGAAGCATCGTACAACGAGCTTCTAGAAACATTAAAGAATAAAAGTGCTTCTGTGATTGGGTTAGTTGGATTAGGAGGCTCAGGGAAAACTACTTTGGCAAAAGAAGTGGGTAAAAAGGCTGAAGAGATGAAACTCTTTGAGAAGGTTATCATGGTAACGGTGTCTCAAACACCAAATATCACAAGTATCCAAGATCAGATTGTTGACCAATTGAGTTTCAAGTTAAAGGAAGCATCAGATATAGGTAAAGCAAAAAGACTATCAGAGAGATTAAGGAAAGGTACAACTCTTTTAATCTTGGATGATGTATGGGAAAAGCTAAACTTTGAAGCTTTAGGTATTCCATTTGATGAAAGCTGCGAGACTTGTTGTGTACTCCTAACAACTCGAAATATGGAAATATGCAATTTTATGCAATGCCAAAGTATAATTAAACTTGATCTCTTAACTGAAAATGAAGCATTGACTTTGTTCAAAAAATATGCAAATATAACTGATGGATTGCCCATTGCAATTGTGACAATCGCAAGCACGCTAAAGGGGAAAACTATTGAAGGTTTTAAGTTAGCATTGTCAAGGCTAGAAAATTCTAAGCCACTAGATGTTCCAAAAGGTTTAACAAGTCCTTATGTTTGTCTTGAATTAAGTTACAAGAATTTGACAAACCAATTGGCTCAATCTTTACTATTGTTGTGTTCTATGTTTCCAGAGGATTATGAAATAGATTTGGAAGAGGATTTCACACAGAGAGAGATGCATGAAGCCATTGACATTCTGAAGAGTTGTTTTTTGTTAATGCAAGCAGGAACAAAAGAAAATGTAAAAATGCATGATTTGGTTCGTGATGTAGCCTTGTGGATTGCGTCTAAAAGTGGTCAAGCGATTTTTACAGGTACTGAAGTGGATCCAAGTGTGTTGGCAAATGATGAAATCATGAAAGATAAGCAAGCAATAGCCTTATGGAATAATGTCTGGAAAAGTGCTTTTCTCGATTATAGAATAAATTGTCCGACTCTTGAAATTCTCTTGCTTTATTCTAAAGGTCGCATAAAAGTATCAGATATGAGTCCTCAAAGTTGGGAAAAGATTAAAACCTTAGCAATCAAAAGTATAAATAGTTACCATGAGAAATTGTCTTTGCCAGAATCACTGAAGTCGTTAAAAAATCTTCGAACACTGTGCTTGAGAGGTCATAATTTAAGTGACATATCTTTTGTGGAAAGACTGCAAGCACTTGAGATTCTGGACTTGCGTGACTCTAATTTTGAAAAACTTCCTGTTGGGATTGTAGAATTAAAGAAGTTGAAGATTCTGGATTTGTACAGATGTAGGATTAAGGAAAGAAATGTTGAATCTTACAAAGTTGTAGAAAAGTGTTTGCAGTTAGAGGAATTGTATTTGTACTTGATCGATTTAGAAAAATGCTCTGCACATGATGTCTCTTTCTCCAAATTACAAAGGTATGTTATAACAAACACCAATTATAGTGAGGAGTTGGTTGGTACAATTATGAAAAAATACGCACAGTCTAGAAGCTTATTAATACAAAACTTTGATGTTGCTGCTCAAAATTTTATATCACTACCAATGAAGGATCTCTTCATGAGAGCAGAGTTTCTTCTTCTGAAGGACCTTGGGGGAGATTATAAAAATATAATCCCATCCATGGATCCACAAGGCATGAATCACTTGACTGCCCTAGAACTCCGATTGTGTAAAAGGATAGAATGCCTAGTTGATAACACTAGCAATACCAACAACAATATTGATTTTCTTCAACCTGAATTTGTATTCCTTAAACTTGTTTACTTAAAGTTGGAAAGTTTACATAACCTTGGAGAGGTGTTTTGTGATCCCTCTTCTCGATGTTCCCTCGAAAATTTAGAAGAGTTCTTGATAGAAGATTGTAGTAATTTGAAGAGCATCTCCTTTCCAAGGAAGTCTAAGCTATGCAATCTGAAGGTGCTTTCAATATCTGATTGTCCTATGCTAACTTCTCTCTTTGTGCCATCCGGTTTCCAATCTCTAGTGTTGTTAGAGAAACTAACAATAATTAACTGCAACGCCTTGAGGCACATAATAGATGAAGTGGAAGAAGGGAACGATGTTCTTTCAAGCACCTCAAGTCATTCATATTTGACACTCCAAAAATTAAGGATTCTTCGAATTAAAAGTTGCAACAATTTGGAGTATACATTCTCTGTGTTTTTAGCCGTAAGGCTATATGCATTTGGCAGTGAAAAGGAACGTAATAATGCAGTGTATCCGAGTGAAAAATTCTTTTCTAATTTGGATACTCTACATTTGTGCAAGTTACCAAATGTGATTGAAATTTGGCCTGAATATTCTCGTCCACATTTCCCCACTCTTAAAAACTTATTTTGCATGGATTGTCCCAAATTGCTTGACTCCACATTTAAGACGGCGACTGCTTCAAATCTCCAACAAAAAAACAACTTCAATGCCTCCAAAAGCTTATACCATATTCACATAAATGGATGTCCAAAACTGAAAACCATCTTCTCCATCACTGTTGTTACAAGTTTACCAATGCTGAGATTTCTGATTATAGATAACTGTGATGAATTGGAACAAATATTTGATTTAGGTGATGCACCACAACTCCAAACCCTGGATTCTTCCCAACAACTTTGCTTCCCAAAACTCAGAAACATTGAAGTTAAAAACTGCAATAAGTTGAAATATCTTTTTTATAATCTATTGGCTAGTCATTTTCCCAGTCTGTTTATTTTGAAAATAGAAGAGTGTTTTCAGTTACACAAGGCTTTTGGTTTTGAAAATGAAGCTGATGATGGTGGTGAAGAAGAGACGGCTAAAAAGGGGGAACGAGTACTACTACAGAAACTGAAACATATAAAACTCAGAAATTTGCCAAACTTCGAAGAGATTCACCACGAATTTAAGTTAAAAGAAAATCTTTACAGTCATATGATGGTGGAATGTCCTAAGTATTCTCCAAGTTTATATCTAGATCCAGGTAAAATTCACATGTCCTTTTTCTAG 3480 0.3517 MEDFFLSIATKIVEYAVFPILDHAQYLCCFHNFASNLPNVKEQLELTRESVNKRIREITNKTEKIEPPVEKWLKDVERVLEEVRLLEQRILNVNKSYLRRQCQYSLAKEIARKTTKMIQLNRDSKFEPFSTIIELPGMKYYSSNDFVMFQSAEASYNELLETLKNKSASVIGLVGLGGSGKTTLAKEVGKKAEEMKLFEKVIMVTVSQTPNITSIQDQIVDQLSFKLKEASDIGKAKRLSERLRKGTTLLILDDVWEKLNFEALGIPFDESCETCCVLLTTRNMEICNFMQCQSIIKLDLLTENEALTLFKKYANITDGLPIAIVTIASTLKGKTIEGFKLALSRLENSKPLDVPKGLTSPYVCLELSYKNLTNQLAQSLLLLCSMFPEDYEIDLEEDFTQREMHEAIDILKSCFLLMQAGTKENVKMHDLVRDVALWIASKSGQAIFTGTEVDPSVLANDEIMKDKQAIALWNNVWKSAFLDYRINCPTLEILLLYSKGRIKVSDMSPQSWEKIKTLAIKSINSYHEKLSLPESLKSLKNLRTLCLRGHNLSDISFVERLQALEILDLRDSNFEKLPVGIVELKKLKILDLYRCRIKERNVESYKVVEKCLQLEELYLYLIDLEKCSAHDVSFSKLQRYVITNTNYSEELVGTIMKKYAQSRSLLIQNFDVAAQNFISLPMKDLFMRAEFLLLKDLGGDYKNIIPSMDPQGMNHLTALELRLCKRIECLVDNTSNTNNNIDFLQPEFVFLKLVYLKLESLHNLGEVFCDPSSRCSLENLEEFLIEDCSNLKSISFPRKSKLCNLKVLSISDCPMLTSLFVPSGFQSLVLLEKLTIINCNALRHIIDEVEEGNDVLSSTSSHSYLTLQKLRILRIKSCNNLEYTFSVFLAVRLYAFGSEKERNNAVYPSEKFFSNLDTLHLCKLPNVIEIWPEYSRPHFPTLKNLFCMDCPKLLDSTFKTATASNLQQKNNFNASKSLYHIHINGCPKLKTIFSITVVTSLPMLRFLIIDNCDELEQIFDLGDAPQLQTLDSSQQLCFPKLRNIEVKNCNKLKYLFYNLLASHFPSLFILKIEECFQLHKAFGFENEADDGGEEETAKKGERVLLQKLKHIKLRNLPNFEEIHHEFKLKENLYSHMMVECPKYSPSLYLDPGKIHMSFF* 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2559 1159 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 25 953 - -
Pvu8g2559 1159 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 973 1141 - -
Pvu8g2559 1159 CDD AAA 156 281 - -
Pvu8g2559 1159 Coils Coil 41 61 - -
Pvu8g2559 1159 Pfam NB-ARC domain 154 315 IPR002182 GO:0043531
Pvu8g2559 1159 SUPERFAMILY L domain-like 427 1047 - -
Pvu8g2559 1159 SMART AAA_5 167 300 IPR003593 -
Pvu8g2559 1159 Gene3D Ribonuclease Inhibitor 690 889 IPR032675 -
Pvu8g2559 1159 Gene3D Ribonuclease Inhibitor 909 1088 IPR032675 -
Pvu8g2559 1159 Gene3D Ribonuclease Inhibitor 453 673 IPR032675 -
Pvu8g2559 1159 PANTHER - 25 953 - -
Pvu8g2559 1159 PANTHER - 973 1141 - -
Pvu8g2559 1159 PRINTS Disease resistance protein signature 170 185 - -
Pvu8g2559 1159 PRINTS Disease resistance protein signature 242 256 - -
Pvu8g2559 1159 PRINTS Disease resistance protein signature 317 331 - -
Pvu8g2559 1159 PRINTS Disease resistance protein signature 582 598 - -
Pvu8g2559 1159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 381 IPR027417 -
Pvu8g2559 1159 Coils Coil 69 96 - -
Pvu8g2559 1159 Gene3D - 141 297 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2559 Pvu-Chr8 56183153 56188552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2559 156 442 WRKY Transcription Factor Family AT5G45050 23.692 2.66e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2559 - - pvu:PHAVU_008G245200g 1299.26