Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2558 ATGGAGGATTTTTTTCTTTCCATCGCAACAAAGATTGTAGAATATGCAGTATTTCCAATTTTAGACCATGCTAAATACTTGTGTTGTTTGCACAACTTTGCTTCGAATCTTCCAAATGTCAAAGAACAATTGGAATTGACTCGAGAGAGTGTGAATGAGCGAATTAGAGAAGCAACTAATAAGACTGAAAAAGTTGAATCGGTTGTTGAGAAGTGGCTAAAAGATGTTGAGAAAGTTTTAAATGAAGTACAATTGCTGGAAGAAAGAATATCGAATGTAAACAAGAGCTATTTGAGAAGGCAATGTCAATATTCTCTTGCAAAAGAAATAGCAAGAAAAACAACTAAAATGATTCAGCTTGATCGTAATAGCAAGTTTGAATCGTTTTCCATGATTACTGAACTTCCAGGCATGGAGTACTATTCTTCCAATGATTTCACTATGTTCAAATCTACAAAAGCATCATACAACAAGCTTCTAGAAGCATTAAAGAATAAAAGTGTTTTCATGATTGGGTTAGTTGGACTAGGAGGCTCAGGGAAAACTACTTTGGCAAAAGAAGTGGGTAAAAAGGCTGAAGAGATGAAACTCTTTGAGAAGGTTGTCATGGCAACGGTGTCTCAACCACCAAATATCATAAGTATCCAAGATCAAATTGCTGACCAATTGAGTTTGAAGATAAATGAAGTATCAGATATAGGTAGAGCAAAAAGACTATCAAAGAGATTAAGGGAAGGTACAACTCTTTTAATCTTGGATGATGTATGGGAAAAGCTAAACTTTGAAGCTTTAGGTATTCCATTTGATGAAAGCTGCAAGACTTGTTGCGTACTCCTAACAACTCGAAATAGGGAAATATGCAATCTTATGCGATGCCAAAGTATAATTAAACTTGATCTCTTAACTGACAATGAAGCATGGACTTTGTTCAGCAAATATGCAAATGTAACTGATGTCTCCTCAGAACCTTTGAATGGTGTGGCCAAAAAAATTATTAATGAATGTAAGGGATTGCCCATTGCAATTGTGACGGTCGCAAGCACGTTAAAGGGGAGAACTATTGAAGATTTTGAGTTAGCATTGTCAAGACTAGAAAATTCTAAACCACTAGATATTCCAAAAGGCTTAATAAGTCCTTATGTTTGTCTTGAATTAAGTTACAATAATTTGACAAACCAATTGGCTCAATCTTTATTATTGTTGTGTTCTATGTTTCCAGAGGATTATGAAATAGATTTGGAAGATTTATTTCGATTTGTAAGAGGATTTCACACAGTTGGGACGTTTGCCACAATGGAGAATGCAAGGAGAGAGATGCATGAAGCTATTGACATTCTGAAGAGTTGTTTTTTGTTAATGCAAGCCAGAACAAAAGAAAATGTAAAAATGCATGATTTGGTTCGTGATGTAGCCTTGTGGATTGCATCTAAAAGTGGTCAAGCAATTTTCACAGGTACAGAAGTGGATCCAAGTGTGTTGGCAGATGATGAAATCATGAAAGATAAGCAAGCAATAGCCTTATGGCCTAATGTGACAGGAAATGATTTTCTCGATTATAGAATAAATTGTTCGACACTTGAAATTCTCTTGCTTTATTCTAAAGGTCGCATTAAAGTGTCAGATACGGCTCCTAAAAGTTGGGAAAATGTTAAAACCTTAGCAATCAAAAGTTTAAATCGGCAAAGTAAAGTTTTGTCTTTGCCAGAGTCATTGAAGTCAGCAAAAAATCTTCGAACATTGTCCTTGAGAAAACATGATTTAGGTGACATATCTTTTGTGGAAGGACTGCAAGCACTTGAGATTCTTGACTTGCGTGACTCTAAATTTGAAAAAATTCCTGTTGGGATTGTTGAATTAAAGAAGTTGAAGATTCTGGATTTGTACAGATGTACGATTAAGGAAAGGAATGTTGAACCTTACAAAGTTGTAGGAAAGTGTTTGCAGTTAGAGGAATTGTATTTGTACTTGATCAATTTAGTAGACTACTTTCCACATGACGTCTCTTTTTCCAAATTACAGAGGTATGTTATAACAAACACCAATTATATGGATGTGTTCGATAATACTACAATTATGAAAAAATACGCAAAGTCTAGAAGCTTATTAATAGACAAGTTTGATGTTGCTGCTCAAAATTTTGTATCACTACCAATCAAGGATCTCTTTCTGAGAGCAGAGTTCCTTCATCTGGAGGACCTTAAGGGAAATTTTAAAAATATAATCCCATCCATGGATCCACAAGGCATGAATCACTTGACTGCCCTAAGACTCAAAAATTGCAAAAAGATAGAATGTCTCGTTGATAGCACTATGAATACCAGCAACAGTGTATTCTCTAAACTTGTTTACCTAAGTTTGGAAAGCTTATGTAGCCTTCAAGAGGTTTTTTGTGATCCCTCTTCGCGATGTTTCCTCGAAAATTTAGGAAAGCTCTTGATACAAAATTGTAGTAAATTGAAGAAATGTCCTCTGTTAACTTCTCTCTTCGTGCCATCCAGTGTCCAATCTCTAGTGTTGTTAGAGGAACTAACAATATCTTCCTGCAGCGCATTGAGGCACATAACAGAAGAAGTGGAAGAAAGCAACAATGTTCTTTCAAGCCCTCAAAGTCCTTCATCTTTGACACTCCAAAAATTAAGGATTCTTCGTATTGAAAAGTGCAACAATTTGGAGTATATATTCTCTATGTGTTTAGCCGTAAGGCTAGTAAGTTTGGAAATTGTGAATATATATGAGAACAGGGGGTTGAAATATGTATTTGGCAGTGAAAAAGAACGTAATATTGCAGTGTACCCGAGTTTTCAACAGACTGATACCAAAGTTTTTTCTAATTTGGATACTCTATATTTGACGCACTTACCAAATGTAATTGACATTTGGCCGGAATATTATCGTTCACATCTTCCAAATGTTAAAAGGTTAGCTTGCGTTGGTTGTCCGAAATTGCTTGACTCTTCCATATTTGAGATGGTGACTGCTTCAAATCTCCAGCAAAATTCAACTTCAATGCTTTGCTTGTGTGATCTTAGAGTAAAAGGTATCTTCCAATTCCAAATGGGAGAAGAAGGGGGCAGTGGAGAACTACTTCCTTTAAACTTGGATATAACTTATCTTGAATTGGGGAATCTACCTGAGCTGAACTTCATATGGAAGGGTCCCACAGGTTTTCTAAGCCTCCAAAACCTTGCAATTGTTTCCATATATGAATGTCCAAAATTAAAAACCATCTTCGCCATCACTGTTGCTACAAGTTTACCAATCCTAAAAGAACTGTATATACAGAAATGTGATGAATTGGAACAAATATTTGATTTAGGTGATGCACAACAACTCCAAACCCAACAACTCTGCTTCCCAAAACTCGTTTACATTGTAGTTGAAGGGTGCAATAAGTTGAAATATCTTTTTTATAATCTATCGGCTAGTCACTTTACAAGTCTGGAATTTTTGAGAATAGAAGAGTGCTCTCAATTACACAAGGTTTTTGGTTTTCAACAAGAAGCTGATGACGGCGGTGAAGAAGAGACGGGTAAAAAGGGAGAACAAGTACTACTACAGATACTGACATATATTGAACTAAAAAATTTGCCAAACTTCGAACAGATTCACTACGGATTTAAGTTAAAAGAAGATGTCGAAAATATCATAGAGGAATGTCCTAAGTATTCTCCAAGTTTATATCTACATCCAGTTAACGTTGACCAGCACTCCTTTGGAGGTTTTGTCCTGTTGGAGAATCTCGAGCATGAAAGAGGAGACGGGAACGGCACTGTCGTAGAGGAAGGGGGACCAGACGGCGGTGGTGAGGGAGACTTGTTGGCCGCAATAGGAGGCGTAGGCCTCGAGTTTGGTGTAGGATGCGGTGGTTGGGATTGA 3876 0.3658 MEDFFLSIATKIVEYAVFPILDHAKYLCCLHNFASNLPNVKEQLELTRESVNERIREATNKTEKVESVVEKWLKDVEKVLNEVQLLEERISNVNKSYLRRQCQYSLAKEIARKTTKMIQLDRNSKFESFSMITELPGMEYYSSNDFTMFKSTKASYNKLLEALKNKSVFMIGLVGLGGSGKTTLAKEVGKKAEEMKLFEKVVMATVSQPPNIISIQDQIADQLSLKINEVSDIGRAKRLSKRLREGTTLLILDDVWEKLNFEALGIPFDESCKTCCVLLTTRNREICNLMRCQSIIKLDLLTDNEAWTLFSKYANVTDVSSEPLNGVAKKIINECKGLPIAIVTVASTLKGRTIEDFELALSRLENSKPLDIPKGLISPYVCLELSYNNLTNQLAQSLLLLCSMFPEDYEIDLEDLFRFVRGFHTVGTFATMENARREMHEAIDILKSCFLLMQARTKENVKMHDLVRDVALWIASKSGQAIFTGTEVDPSVLADDEIMKDKQAIALWPNVTGNDFLDYRINCSTLEILLLYSKGRIKVSDTAPKSWENVKTLAIKSLNRQSKVLSLPESLKSAKNLRTLSLRKHDLGDISFVEGLQALEILDLRDSKFEKIPVGIVELKKLKILDLYRCTIKERNVEPYKVVGKCLQLEELYLYLINLVDYFPHDVSFSKLQRYVITNTNYMDVFDNTTIMKKYAKSRSLLIDKFDVAAQNFVSLPIKDLFLRAEFLHLEDLKGNFKNIIPSMDPQGMNHLTALRLKNCKKIECLVDSTMNTSNSVFSKLVYLSLESLCSLQEVFCDPSSRCFLENLGKLLIQNCSKLKKCPLLTSLFVPSSVQSLVLLEELTISSCSALRHITEEVEESNNVLSSPQSPSSLTLQKLRILRIEKCNNLEYIFSMCLAVRLVSLEIVNIYENRGLKYVFGSEKERNIAVYPSFQQTDTKVFSNLDTLYLTHLPNVIDIWPEYYRSHLPNVKRLACVGCPKLLDSSIFEMVTASNLQQNSTSMLCLCDLRVKGIFQFQMGEEGGSGELLPLNLDITYLELGNLPELNFIWKGPTGFLSLQNLAIVSIYECPKLKTIFAITVATSLPILKELYIQKCDELEQIFDLGDAQQLQTQQLCFPKLVYIVVEGCNKLKYLFYNLSASHFTSLEFLRIEECSQLHKVFGFQQEADDGGEEETGKKGEQVLLQILTYIELKNLPNFEQIHYGFKLKEDVENIIEECPKYSPSLYLHPVNVDQHSFGGFVLLENLEHERGDGNGTVVEEGGPDGGGEGDLLAAIGGVGLEFGVGCGGWD* 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2558 1291 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1022 1221 - -
Pvu8g2558 1291 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 27 982 - -
Pvu8g2558 1291 Gene3D Ribonuclease Inhibitor 510 702 IPR032675 -
Pvu8g2558 1291 Gene3D Ribonuclease Inhibitor 706 928 IPR032675 -
Pvu8g2558 1291 Gene3D Ribonuclease Inhibitor 942 1167 IPR032675 -
Pvu8g2558 1291 Gene3D - 138 297 IPR027417 -
Pvu8g2558 1291 SUPERFAMILY RNI-like 862 1161 - -
Pvu8g2558 1291 Gene3D - 300 386 IPR042197 -
Pvu8g2558 1291 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 399 IPR027417 -
Pvu8g2558 1291 Coils Coil 41 96 - -
Pvu8g2558 1291 PRINTS Disease resistance protein signature 170 185 - -
Pvu8g2558 1291 PRINTS Disease resistance protein signature 242 256 - -
Pvu8g2558 1291 PRINTS Disease resistance protein signature 335 349 - -
Pvu8g2558 1291 PRINTS Disease resistance protein signature 617 633 - -
Pvu8g2558 1291 Pfam NB-ARC domain 157 368 IPR002182 GO:0043531
Pvu8g2558 1291 Gene3D - 387 472 IPR036388 -
Pvu8g2558 1291 SUPERFAMILY L domain-like 459 848 - -
Pvu8g2558 1291 PANTHER - 1022 1221 - -
Pvu8g2558 1291 PANTHER - 27 982 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2558 Pvu-Chr8 56171768 56177165 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2558 156 477 WRKY Transcription Factor Family AT5G45050 24.925 7.29e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2558 - - pvu:PHAVU_008G245200g 1576.99