Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2556 ATGGAGGACTTTTTTCTTTCCATTGCGACAAAGATTGTAGAATATGCCGTATCTCCAATTTTAGATCATGCTCGGTACTTGTGTTGTTTCCACGACTTTGCTTTGAATCTTTCAAATGACAAAGAACAACTAGAATTGACACGAGACAGTGTGGAGAAGAAAATTAGAGAGCCCACCAATAGGATTGAAAAAGTTGAGCCACCTGTTGAGAAGTGGTTGAAAGATGTTGAAAAAGTCTTGGCTGAAGTGCGACTGCTAGAAGAAAGAATATCGATTGTAAACAAGAGCTATTTGAGAAGGAAATGTCAATATTCTCTTGCAAAAGAAATAGCAAGAAAAACAACTAAAATGATTCAGCTTAATCGTGATAGCAAGTTTGAACCGTTTTCTACAATTATTGAACTTCCAGGCATGAAATATTATTCTTCTAATGGTTTCTTTATGTTCAAATCTACAGAAGCATCATACAACAAGCTTCTAGAAATATTAGAGAATAAGAGTGTTTCCATGATTGGGTTAGTTGGATTAGGAGGCTCAGGAAAAACTACTTTGGCAAAAGAAGTGGGTAAAAAGGCTGAAGAGATGAAACTGTTTCATAAGGTTGTCATAACAACAGTGTCTCAACCGCTAGATATCAAAAGGATCCGAAATGAGATTATTTTACAATTGGGCTTGGATTTAAAGGAAGAATTAGATATAGGTAGAGCACAGAGACTATCACAGAGATTAAGAAAAGATACTACTCTTCTAATCTTGGATGATGTATGGGAAAAACTAAACTTTGAAGATTTAGGTATTCCATTTGATGAAAGCTACAAGGCTTGTTGTATACTCATAACAACTCGCAGTAAAGAAGTATGCACTTCTATGCAATGTCAAAGTATAATTGAACTTAATCTCTTGAGTGATAAAGAAGCATGGACTTTGTTCACACATTATGCAAACATAACTGATGTCTCCTCAGAAGCTTTGAAAGGTGTGGCAAGAAAAATTATTAATGAATGTAAGGGATTGCCCATTGCAATTGTGACGGTCGGAAGCACACTATGGGGGAAAACTATTGAAGATTTTGAGTTAGCATTGTCAAGACTAGAAAATTCTAAGCCACTAAATATTTCAAAAGGCTTGATAAGTCCTTATGCATGTCTCGAATTAAGTTACACTAATTTGAATAACCAATTGGCTCAATCTTTATTATTGTTGTGTTCTATGTTTCCAGAGGATTATGAAATAGATTTGGAAGATTTATTTCGATTTGGAAGAGGATTTTGCACAATTGGGTCGTTTGGAAAAATGGAGAATGCAAGGAGAGAGATGCATGAAGCCATTGACATTCTTAAGAGTTGTTTTTTGTTAATGCAAGTTGGAACAAAAGAAAATGTAAAAATGCATGATTTGGTTCGTGATGTAGCGTTGTGGATTGCATCTAAAAGTGGTCAAGCAATTTTTACAGGTACTGAAGTGGATCCAAGTGTGTTGGCAGATGATGAAATCATGAAAGATAAGCAAGCAATAGCCTTATGGAATAATGTCAGAAAAAATGGTTTTCTCAATTATAGAATAAATTGTCCGACTCTTGAAATTCTCTTGCTTTATTCTAGAAATCGCATAAAAGTATCAGATATGGGTCTTCAAAGCTGGGAAAAGATTAAAACCTTAGCAATCAAAAGTTTAAATATATACAGTGAGGATTTGTCTTTGCCAGAGTCACTGAAGTCATTAAAAAATCTTCGAACACTGTGCTTGAGAGGTCATGATTTAGGTGACATATCTTTTGTGGAAAGACTGCAAGCACTTGAGATTCTTGACTTGCGTGACTCTAATTTTGAAAAACTTCCTGTTGGGATTGTAGAATTAAAGAAGTTGAAGATTCTGGATTTGTACAGTTGTATTATTCAAGAAAAGAATGTTGAACCTTACAAAGTTGTAGGAAAGTGTTTGGCGTTAGAGGAATTGTATTTGTACTTGATCGATTCAAAAGAGTACTTTGGACATGATGTCTCTTTCTCCAAATTACAGAGGTATGTTATAAGAAACACCAGTTATAGTTTTGGAGATGAATTCGACAATACTACAATTATGAAAAAATATGCACAATATAGAAGCTTATTACTAGATAAGTTTGATGTTCCTGCTCAAAATTTTATATCACTACCAATCAAGGATCTCTTTATGAGAGCAGAGTTCCTTCATTTGGAGGACCTTAAGGGAAATTTTAAAAATATAATCCCATCCATGGATCAACGGGGCATGAATCAGTTGAATGCCCTAAGACTCAAATATTGTAAAAAGATAGAATGTCTCATTGATAGCACTATGAATACCAGCAACAACGTATTCTCTAAACTTGGTTACTTAAGTTTGGAAAGTTTACGTAGCCTTCAAAAGATTTTTTGTGATCCCTCTTCGCGATGTTTCCTCGAAAATTTAAGAGAGCTCTTGATAAAAGATTGTAGTAAATTGAACAATATATCTTTTCTAAGGAAGTCTAAGCTATGCAATCTGAAAGTCATTTCAATATCAACATGTCCTCTGCTAACTTCTCTCTTCGTGCCATCCAGTGAACAATCTCTAGTGTTGTTAGAGGAACTAACAATATCTTCCTGCAGCGCATTGAGGCACATAACAGAAGAAGTGGAAGAAAGGAACAATGTTCTTTCAAACACTCAAAGTCCTTCATCTTTGACGCTCCAAAAATTAAGGATTCTTCGTATTGAAAATTGCAACAATTTGGAGTATATATTCTCTGTGTTTTTAGCCGTAAGGCTAGTAAGTTTGGAAAGTGTGATTATTAATGAGAACAGGGGGTTGAAGTATGTATTTGGCAGTGAAAAGGAACGTAATCTTGCAGTGTACCCGAGTTTTCAGCAGACTGATACCAAAACTTTTTCTAATTTGGCTACTCTATCGTTGATGGACTTACCAAATATGATTGACATTTGGCCTGAATATTGTCGCCCACATCTTCCAAATCTTACAAATTTAGACTGCACTGGTTGTCCCAAATTGCTTGACTCTTCCATACTTGAGATGGTGACCGCTTCAAATCTCCACCAAAAAACAACTTCAATGGAGAATCAAATACCATGCTTCACCATTACCAAACTTGAACGCCTTTGCTTATCTGATGTTAGATTTAAAGGTCTCTTCCAATTCCAAATGGGAGAAGAAGGGGGCAGTGGAGAACTTCTTCCTCTAAACTTGGATATAACTTATCTACAATTGGAGAATCTACCTGAGCTCAACTTCATATGGAAGAGCCCCACAGGTTTTCTAAGCCTCCAAAACCTTGAAACTGTTTACATAGATGGATGTCCAAAATTGAAAACCATCTTCTCCATCACTGTTGTTACAAGTTTACCAATGCTGGAATTTCTGTATATAGATAACTGTGATGAATTGGAACAAATATTTGATTTAGGTGATGCACGACAACTCCAAATCCTGTATTCTTCCCAACAACTCTGCTTCCCAAAACTCTATTCCATTACAGTTAAAAAGTGCAATAAGTTGAAATGTCTTTTTTATAATCTATCGGCTAGTCATTTTCCCAGTCTGGGAACTTTGGAAATAGAAGAGTGCTCTCAGTTACACAAGGCTTTTGGTTTTGAACATGAAGTTGATGATGGTGGTGAAGAACAGACGGCTAAAAAGGGAGAACAAGTTCTACTACAGGAACTGACAGATATAACACTCAAAAATTTGCCAAACTTCGAAGAGATTCACCACGGATTTAAGTTAAAAGGAAATGTTGAACATAGCATAAAAGAATGTCCAAAGTATTCTCCAAGTTTATATTTACATCCAGATTTAAGTATTGATTTAAAAAACAAAGTGTGCAATGGACAATGCAACAATGCCTCAACTTTTCACCCTCCGATGCATTAA 3888 0.3544 MEDFFLSIATKIVEYAVSPILDHARYLCCFHDFALNLSNDKEQLELTRDSVEKKIREPTNRIEKVEPPVEKWLKDVEKVLAEVRLLEERISIVNKSYLRRKCQYSLAKEIARKTTKMIQLNRDSKFEPFSTIIELPGMKYYSSNGFFMFKSTEASYNKLLEILENKSVSMIGLVGLGGSGKTTLAKEVGKKAEEMKLFHKVVITTVSQPLDIKRIRNEIILQLGLDLKEELDIGRAQRLSQRLRKDTTLLILDDVWEKLNFEDLGIPFDESYKACCILITTRSKEVCTSMQCQSIIELNLLSDKEAWTLFTHYANITDVSSEALKGVARKIINECKGLPIAIVTVGSTLWGKTIEDFELALSRLENSKPLNISKGLISPYACLELSYTNLNNQLAQSLLLLCSMFPEDYEIDLEDLFRFGRGFCTIGSFGKMENARREMHEAIDILKSCFLLMQVGTKENVKMHDLVRDVALWIASKSGQAIFTGTEVDPSVLADDEIMKDKQAIALWNNVRKNGFLNYRINCPTLEILLLYSRNRIKVSDMGLQSWEKIKTLAIKSLNIYSEDLSLPESLKSLKNLRTLCLRGHDLGDISFVERLQALEILDLRDSNFEKLPVGIVELKKLKILDLYSCIIQEKNVEPYKVVGKCLALEELYLYLIDSKEYFGHDVSFSKLQRYVIRNTSYSFGDEFDNTTIMKKYAQYRSLLLDKFDVPAQNFISLPIKDLFMRAEFLHLEDLKGNFKNIIPSMDQRGMNQLNALRLKYCKKIECLIDSTMNTSNNVFSKLGYLSLESLRSLQKIFCDPSSRCFLENLRELLIKDCSKLNNISFLRKSKLCNLKVISISTCPLLTSLFVPSSEQSLVLLEELTISSCSALRHITEEVEERNNVLSNTQSPSSLTLQKLRILRIENCNNLEYIFSVFLAVRLVSLESVIINENRGLKYVFGSEKERNLAVYPSFQQTDTKTFSNLATLSLMDLPNMIDIWPEYCRPHLPNLTNLDCTGCPKLLDSSILEMVTASNLHQKTTSMENQIPCFTITKLERLCLSDVRFKGLFQFQMGEEGGSGELLPLNLDITYLQLENLPELNFIWKSPTGFLSLQNLETVYIDGCPKLKTIFSITVVTSLPMLEFLYIDNCDELEQIFDLGDARQLQILYSSQQLCFPKLYSITVKKCNKLKCLFYNLSASHFPSLGTLEIEECSQLHKAFGFEHEVDDGGEEQTAKKGEQVLLQELTDITLKNLPNFEEIHHGFKLKGNVEHSIKECPKYSPSLYLHPDLSIDLKNKVCNGQCNNASTFHPPMH* 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2556 1295 Coils Coil 69 89 - -
Pvu8g2556 1295 Gene3D - 300 386 IPR042197 -
Pvu8g2556 1295 Gene3D Ribonuclease Inhibitor 516 658 IPR032675 -
Pvu8g2556 1295 SUPERFAMILY L domain-like 462 1137 - -
Pvu8g2556 1295 PRINTS Disease resistance protein signature 170 185 - -
Pvu8g2556 1295 PRINTS Disease resistance protein signature 242 256 - -
Pvu8g2556 1295 PRINTS Disease resistance protein signature 335 349 - -
Pvu8g2556 1295 PRINTS Disease resistance protein signature 895 911 - -
Pvu8g2556 1295 PANTHER - 19 1003 - -
Pvu8g2556 1295 PANTHER - 1035 1217 - -
Pvu8g2556 1295 Gene3D Ribonuclease Inhibitor 963 1203 IPR032675 -
Pvu8g2556 1295 SUPERFAMILY RNI-like 1034 1197 - -
Pvu8g2556 1295 Gene3D - 387 472 IPR036388 -
Pvu8g2556 1295 Coils Coil 34 54 - -
Pvu8g2556 1295 Gene3D Ribonuclease Inhibitor 659 945 IPR032675 -
Pvu8g2556 1295 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 19 1003 - -
Pvu8g2556 1295 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1035 1217 - -
Pvu8g2556 1295 Pfam NB-ARC domain 154 386 IPR002182 GO:0043531
Pvu8g2556 1295 Gene3D - 142 297 IPR027417 -
Pvu8g2556 1295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 399 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2556 Pvu-Chr8 56150081 56155745 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2556 156 477 WRKY Transcription Factor Family AT5G45050 28.829 1.10e-14 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2556 - - pvu:PHAVU_008G245200g 1682.15