Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2554 AAATGTCAATATTCTCTTGCAAAAGAAATAGCAAGAAAAACAACTAAAATGATTCAGCTTAATCGTGATAGCAAGTTTGAACCGTTTTCTACAATTATTGAACCTCCAGGCATGAAGTATTATTCTTCCAATAATTTCTTTATGTTCAAATCTACAGAAGCATCGTACAACAAGCTTCTAGAAATATTAAAGAATAAAAGTGTTTCTATGATTGGGTTAGTCGGATTAGGAGGATCAGGGAAAACTACTTTGGCAAAAGAAGTGGGTAAAAAGGCTGAAGAGATGAAATTGTTTCATAAGGTTGTCATAACAACAGTGTCTCAACCTCTAAATATCAAAAGGATTCGAGATGATATTATTGATCAATTGAGCTTGGAGTTAAAGGAAGAATCAGATATAGGTAGAGCACATAGACTATCACAGAGATTAAGAGAAAATACAACTCTTCTAATCTTGGATGATGTATGGGAAAAACTAAACTTTGAAGATTTAGGTATTCCATTTGATGAAATTCCATTTGATGAAAGCTACAAGGCTTGTTGTATACTCATAACAACTCGCAGTAAAGAAGTATTCACTTCTATGCCATGTCAAAGTATAATTGAACTTAATCTCTTGAGTGACAAAGAAGCATGGACTTTGTTCACACATTATGCAATCATAACTGATGTCTCCTCAGAAGCTTTGAAAGGTGTGGCAAGAAAAATTATTAATGAATGTAAGGGATTGCCCATTGCAATTGTGACGGTCGCAAGCACGCTAAAGGGGAAAACTATTGAAGATTTTGAGTTAGCATTGTCAAGGCTAGAAAATCCTAAGCCACTAAATATTCCAAAAGGCTTGATAAGTCCTTATGTTTGTCTTGAATTAAGTTACACTAATTTGACTAACCAATTGGCTCAATCCTTTTTATTGTTGTGTTCTATGTTTCCAGAGGACTATGAAATAGATTTGGAAGATTTATTTCGATTTGGAAGAGGATTTTGCATATTTGGGATGTTTGGAACAATGGAGAATGCAAGGAGAGAGATGCATGAAGCCATTGACATTCTGAAGAGTTGTTTTTTGCTAATGGAAGCAGGAAAAAAGAAGAAGGTAAAAATGCATGATTTGGTTCGTGATGTAGCCTTGTGGATTGCGTCTAAAAGTGGTCATACAATTTTCACACGTACCGAAGTGGATCAGGGAGTGTTGAAAAATGATGAAATCATGAAAGATACGAAAGCATTAGCCTTATGGGATAAAAAAGGATATGATTTTCTTAATTATAAAATAAATTGTCCAAAACTTGAAATTCTCTTGCTTTTTTCTTCTGAAGGTGGCCTAAAAGTACTAGATGCGTGTTCTCAAAGCTTGGAAAAACTTAAAACCTTAATCATAAATCCAATGCTGAAAAGAGATAGGCTTTTTTTGCCAGAGTCGATGAAGTCGTTAAAAAATCTTCGAACACTTTGCTTGAGAAATCAAAATTTAGGTGACATATCTTTTGTGGAAAGACTACAAGCACTTGAGATTCTTGACTTGCATGACTCTTCTTTGGAATATTTTCCTGTTGAAATTGTAGAATTAAAGAATTTGAAGCTTCTAGATTTGTTCCAATGTGAGCTTGAGAAAAGTATACTAGGTTATAAAGTTTACGAAGTTGTAGGAAAATGTTTGCAGCTAGAGGAATTGTATTTGTACTTTGTCAATTACGAAGTGGACTTTCCATATGATGTCTCTTTCTCCAAATTACAGAGGTATGATATAGTAAACACCAATTCTTTTGACCTTAGGCGTACCAGAGCTATGAAAAAATACGCACTGTCTAGAAGTTATGTTACTGTTGAAAATTTTATATCATCATCAATCAAGGATCCCTTTATAAGAGCGGAGTTCCTTCATTTGACGAACCTT 1896 0.3407 KCQYSLAKEIARKTTKMIQLNRDSKFEPFSTIIEPPGMKYYSSNNFFMFKSTEASYNKLLEILKNKSVSMIGLVGLGGSGKTTLAKEVGKKAEEMKLFHKVVITTVSQPLNIKRIRDDIIDQLSLELKEESDIGRAHRLSQRLRENTTLLILDDVWEKLNFEDLGIPFDEIPFDESYKACCILITTRSKEVFTSMPCQSIIELNLLSDKEAWTLFTHYAIITDVSSEALKGVARKIINECKGLPIAIVTVASTLKGKTIEDFELALSRLENPKPLNIPKGLISPYVCLELSYTNLTNQLAQSFLLLCSMFPEDYEIDLEDLFRFGRGFCIFGMFGTMENARREMHEAIDILKSCFLLMEAGKKKKVKMHDLVRDVALWIASKSGHTIFTRTEVDQGVLKNDEIMKDTKALALWDKKGYDFLNYKINCPKLEILLLFSSEGGLKVLDACSQSLEKLKTLIINPMLKRDRLFLPESMKSLKNLRTLCLRNQNLGDISFVERLQALEILDLHDSSLEYFPVEIVELKNLKLLDLFQCELEKSILGYKVYEVVGKCLQLEELYLYFVNYEVDFPYDVSFSKLQRYDIVNTNSFDLRRTRAMKKYALSRSYVTVENFISSSIKDPFIRAEFLHLTNL 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2554 632 Gene3D - 40 202 IPR027417 -
Pvu8g2554 632 SUPERFAMILY L domain-like 360 587 - -
Pvu8g2554 632 Pfam NB-ARC domain 54 271 IPR002182 GO:0043531
Pvu8g2554 632 Gene3D Ribonuclease Inhibitor 382 600 IPR032675 -
Pvu8g2554 632 PANTHER - 2 561 - -
Pvu8g2554 632 PRINTS Disease resistance protein signature 70 85 - -
Pvu8g2554 632 PRINTS Disease resistance protein signature 142 156 - -
Pvu8g2554 632 PRINTS Disease resistance protein signature 240 254 - -
Pvu8g2554 632 PRINTS Disease resistance protein signature 521 537 - -
Pvu8g2554 632 Gene3D - 292 377 IPR036388 -
Pvu8g2554 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 306 IPR027417 -
Pvu8g2554 632 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 2 561 - -
Pvu8g2554 632 SMART AAA_5 67 206 IPR003593 -
Pvu8g2554 632 Gene3D - 205 291 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2554 Pvu-Chr8 56140136 56142031 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2554 56 382 WRKY Transcription Factor Family AT5G45050 28.824 2.24e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2554 - - pvu:PHAVU_008G2468000 1246.49