Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2550 ATGGAGGACTTTTTTCTTTCCATCGCAACAAAGATTGTAGAATATGCAGTATCTCCAATTTTAGACCATGCTAAGTACTTGTGTTGTTTCCACAACTTTGCGTTGAATCTTTCAAATGACAAAGAACAACTAGAATTGACACGAGACAGTGTGAAGAAGAAAATTAGTGAGGCCACAAATAGGATTGAAAAAGTTGAGCCACCTGTTGAGAAGTGGTTGAAAGATGTTGAAAAAGTCTTGCACGAAGTGCGACTCCTAGAAGAAAGAATTTTGAATGTAAACAAGAGCTATTTGAGAAGGAAATGTCAATATTCTCTTGCAAAAGAAATAGAAAGAAAAACAACTAAAATGATTCAGCTTAATCGTGATAGCAAGTTTGAACCATTTTCTACAATTATTGAACTTCCAGGCATGAAGTATTATTCTTCCAATGGTTTCTTTATGTTCAAATCTACAGAAGCATCGTACAACAAACTTCTAGAAATATTAAAGAATAAAAGTGTTTCCATGATTGGGTTAGTTGGATTAGGAGGCTCAGGGAAAACTACTTTGGCAAAAGAAGTGGGTAAAAAGGCTGAAGAGATGAAACTGTTTCATAAGGTTGTCATAACAACAGTGTCTCAACCGCTAGATATCAAAAGGATCCGAAATGAGATTATTTTACAATTGGGCTTGGATTTAAAGGAAGAATTAGATATAGGTAGAGCACAGAGACTATCACAGAGATTAAGAAAAGATACTACTCTTCTAATCTTGGATGATGTATGGGAAAAACTAAACTTTGAAGATTTAGGTATTCCATTTGATGAAAGCTACAAGGCTTGTTGTATACTCATAACAAGTCGCAGTAAAGAAGTATGCACTTCTATGCAATGTCAAAGTATAATTGAACTTAATCTCTTGAGTGACAAAGAAGCATGGACTTTGTTCACACATTATGCAAACATAACTGATGTCTCCTCAGAAGCTTTGAAAGGTGTGGCAAGAAAAATTATTAATGAATGTAAGGGATTGCCCATTGCAATTGTGACGGTCGGAAGCACACTAAAGGGGAAAACTATTGAAGATTTTGAGTTAGCATTGTCAAGGCTAGAAAATTCTAAGCCACTAAATATTCCAAAAGGCTTGACAAGTCCTTATGCTTGTCTTGAATTAAGTTACACTAATTTGAATAACCAATTGGCTCAATCTTTATTATTGTTGTGTTCTATGTTTCCAGAGGATTATGAAATAGATTTGGAAGATTTATTTCGATTTGGAAGAGGATTTCGCACAGTTGGGACGTTTGGAACAATGGAGAATGCAAGGAGAGAGATGCATGAAGCTATTAACATTCTTAAGACTTGTTTTTTGTTAGTGCAAGCTGGAACAAAAGAAAATGTAAAAATGCATGATTTAGTTCGTGATGTAGCCTTGTGGATTGCGTCTAAGAGTGGTCAATCAATTTTCACAGGTACTGAAGTGGATCCAAGTGTGTTGGAAGATGATGAATTCATGAAAGATATGCAAGCAATAGCCTTATGGAATAATGTCACAAAAAATGGTTTTCTTGATTATAGAATAAATTGTCCGAATCTTGAAATTCTCTTGCTTTATTCTAAAGGTCGCATAAAAGTATCAGATATGGCTCCTCAAAGTTGGGAAAAGATTAAAACCTTATCAATCAAAAGTTTAAATAAGGACAATAAGGATTTGTCTTTGCCAGAGTCACTGAAGTTGTTAAAAAATCTTCGAACACTGTGCTTGAGAGGTCATTATTTAGGTGACATATCTTTTGTGGAAAGACTGCAAGCACTTGAGATTCTTGACTTACGTTACTCTAATTTTGAAAAACTTCCTGTTGGGATTGTAGAATTAAAGAAGTTGAAGATTCTGGATTTGTACAGATGTAGGATTAAGGAAAGGAATGTTGAACCTTACAAAGTTGTAGAAAAGTGTTTGCAGTTAGAGGAATTGTATTTGCACTTGAGAAATTTAGAAAACTACTTTCCACATGACGTCTCTTTTTCCAAATTACAGAGGTATGTTATAAAAAACATCTTTTCTGTGTTCGATGATACTACAATCATGAAAAAATACGCACAGTCTAGAAGCTTATTAATAGACAAGTTTGATGTTGCTGCTCAAAATTTTATATCACTACCAATCAAGGATCTCTTTATGAGAGCAGAATTTCTTCATCTGGAGAACCTTCGGGGAGATTATAAAAATATAATCCCATCCATGGATCCACAAGGCATGAATCACTTGACTGCCCTAGAACTCCGATTGTGTAAAAGGATAGAATGCCTAGTTGATAACACTAGCAATACCAACAACAATATTGATTTTCTTCAACCTAAATTTGTATTCCTTAAACTTGTTTACTTAAGGTTGGAAAGATTATGGAACCTTGAAGAGGTGTTTTGTGATCCCTCTTCCCGATGTTCCCTCGAAAATTTAGAAGAGTTCTTGATACAAGGTTGTAGTAATTTGAAGAGCATCTCCTTTCCAAGGAAGTCTAAGCTATGCAATCTGAAGGTCCTTTCAATATCTAGTTGCCCTATGCTAACTTCTCTCTTCGTGCCATCCGTTGTCCAATCTCTAGTGTTGTTAGAGGAACTAAGAATATCTAGATGCAGCACATTGAGGCACATAATAGAAGAAGTGGAAGAAGGGAACAATGTTCTTTCAAGCACCCCAAGTCATTCATATTTGACGCTCCAAAAATTAAAGATTCTTTGTATTGAAAAATGCAACAATTTGGAGTATATATTCTCTGTGTTTTTAGCCGTAAGGCTAGTAAGTTTGGAATATGTGAGTATTGATTCGAACATGAGGTTGAAGTATGCATTTGGTAGTGAAAAGGAACGTAATAATGCAGTATATCCGAGTTTTCAGCAGACTGATACCAAATTCTTTTCTAATTTGGATTCTCTATATTTGCGGGAGTTACCAAATCTGATTGACATTTGGCCTGAATATTGTCGTCCACATCTTCCAAATCTTAAAAGTTTAGAATGCAGTGATTGTCCCAAATTGCTTGGCTCCATATTTGAGATGGTGACTGCTTCAAATCTCCAGCAAAAAACAACTTTAATGGAGAATGAAATATCATGCTTCATTACCAACACATTCAACCAACTTGAATGGTTTTGGTTATGTGATGTTAGAGTGAAAGGTCTCTTCCAAATCCAAATGGGAGAAGAAGGGGGCAGTGGAGAACTTCTTCCTCTAAATTTGGATATAACTTATCTATACTTGGAGAATCTACCTGAGCTCAACTTCATATGGAAGGGCCCCACAGGTTTTCTAAGCCTCCAAAAGCTCCACTTTGTTAACATATATGGATGTCCAAAATTGAAAACCATCTTCTCCATCACTGTTGTCACAAGCTTACCAATGCTGGAAAACCTGTATATAGATAACTGTGATGAATTGGAACAAATATTTGATTTAGGTGATGCACAACAACTCCAAACCCTATATTCTTCCCAACAACCGTGCTTCCCAACACTCTCAAGTATTCAGGTTGAAAAGTGCAATAAGTTGAAATGTCTTTTTTATAATCTATCGGCTAGTCATTTTACCAGTTTGGAAACTTTGAAAATAGAAGAGTGCTCTCAGTTACACAAGGCTTTTGGTTTTGAACAAGAAGCTGATGATGGTGGTGGAGAAGAGACGGGTAAAAATGGAGAACAAGTTCTACTACAGGAACTGACACTTATCACACTAAAAAATTTGCCAAACTTCGAAGATATTCACCACGGATTTAAGTTAAAAGGAAATGGTGAACATATCATAGAGGAATGTCCTAAGTATTCTCCAAGTTTACATCTAGATCCAGGATTCAAGAATTTGAATGGGAATTGGTGA 3855 0.3556 MEDFFLSIATKIVEYAVSPILDHAKYLCCFHNFALNLSNDKEQLELTRDSVKKKISEATNRIEKVEPPVEKWLKDVEKVLHEVRLLEERILNVNKSYLRRKCQYSLAKEIERKTTKMIQLNRDSKFEPFSTIIELPGMKYYSSNGFFMFKSTEASYNKLLEILKNKSVSMIGLVGLGGSGKTTLAKEVGKKAEEMKLFHKVVITTVSQPLDIKRIRNEIILQLGLDLKEELDIGRAQRLSQRLRKDTTLLILDDVWEKLNFEDLGIPFDESYKACCILITSRSKEVCTSMQCQSIIELNLLSDKEAWTLFTHYANITDVSSEALKGVARKIINECKGLPIAIVTVGSTLKGKTIEDFELALSRLENSKPLNIPKGLTSPYACLELSYTNLNNQLAQSLLLLCSMFPEDYEIDLEDLFRFGRGFRTVGTFGTMENARREMHEAINILKTCFLLVQAGTKENVKMHDLVRDVALWIASKSGQSIFTGTEVDPSVLEDDEFMKDMQAIALWNNVTKNGFLDYRINCPNLEILLLYSKGRIKVSDMAPQSWEKIKTLSIKSLNKDNKDLSLPESLKLLKNLRTLCLRGHYLGDISFVERLQALEILDLRYSNFEKLPVGIVELKKLKILDLYRCRIKERNVEPYKVVEKCLQLEELYLHLRNLENYFPHDVSFSKLQRYVIKNIFSVFDDTTIMKKYAQSRSLLIDKFDVAAQNFISLPIKDLFMRAEFLHLENLRGDYKNIIPSMDPQGMNHLTALELRLCKRIECLVDNTSNTNNNIDFLQPKFVFLKLVYLRLERLWNLEEVFCDPSSRCSLENLEEFLIQGCSNLKSISFPRKSKLCNLKVLSISSCPMLTSLFVPSVVQSLVLLEELRISRCSTLRHIIEEVEEGNNVLSSTPSHSYLTLQKLKILCIEKCNNLEYIFSVFLAVRLVSLEYVSIDSNMRLKYAFGSEKERNNAVYPSFQQTDTKFFSNLDSLYLRELPNLIDIWPEYCRPHLPNLKSLECSDCPKLLGSIFEMVTASNLQQKTTLMENEISCFITNTFNQLEWFWLCDVRVKGLFQIQMGEEGGSGELLPLNLDITYLYLENLPELNFIWKGPTGFLSLQKLHFVNIYGCPKLKTIFSITVVTSLPMLENLYIDNCDELEQIFDLGDAQQLQTLYSSQQPCFPTLSSIQVEKCNKLKCLFYNLSASHFTSLETLKIEECSQLHKAFGFEQEADDGGGEETGKNGEQVLLQELTLITLKNLPNFEDIHHGFKLKGNGEHIIEECPKYSPSLHLDPGFKNLNGNW* 1285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2550 1284 Coils Coil 69 89 - -
Pvu8g2550 1284 Gene3D Ribonuclease Inhibitor 705 1033 IPR032675 -
Pvu8g2550 1284 Gene3D Ribonuclease Inhibitor 1067 1214 IPR032675 -
Pvu8g2550 1284 Gene3D - 142 297 IPR027417 -
Pvu8g2550 1284 Gene3D Ribonuclease Inhibitor 493 681 IPR032675 -
Pvu8g2550 1284 SUPERFAMILY L domain-like 462 1045 - -
Pvu8g2550 1284 PRINTS Disease resistance protein signature 170 185 - -
Pvu8g2550 1284 PRINTS Disease resistance protein signature 242 256 - -
Pvu8g2550 1284 PRINTS Disease resistance protein signature 335 349 - -
Pvu8g2550 1284 PRINTS Disease resistance protein signature 617 633 - -
Pvu8g2550 1284 Gene3D - 300 383 IPR042197 -
Pvu8g2550 1284 PANTHER - 19 1007 - -
Pvu8g2550 1284 PANTHER - 1094 1250 - -
Pvu8g2550 1284 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 19 1007 - -
Pvu8g2550 1284 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1094 1250 - -
Pvu8g2550 1284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 399 IPR027417 -
Pvu8g2550 1284 Gene3D - 384 472 IPR036388 -
Pvu8g2550 1284 Coils Coil 34 61 - -
Pvu8g2550 1284 SUPERFAMILY RNI-like 1039 1204 - -
Pvu8g2550 1284 Pfam NB-ARC domain 154 388 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2550 Pvu-Chr8 56117566 56123218 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2550 156 477 WRKY Transcription Factor Family AT5G45050 28.313 1.25e-14 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2550 - - pvu:PHAVU_008G245200g 1654.42