Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2546 ATGGCGGATGAAGCTCAAAATGAGCTGAAGGAGGAGGTTCCAGAAATTGTACCTTTTGACCCTACCAAGAAGAAGAAGAAAAAGAAAATTACAATTGTAGATCCGGCTGATGACCCAGTGGAGAAATTGGCTGAGAAGACGGATAACCTCACAGTTTCTGATGGGGTTGAGGCTGCATTTACTGGTTTGAAAAAGAAAAAGAAAAAGCCTGTTGAAATCAGTAACTTGAATGAAGATAGCGGAGATGCAATTGAAGATTTGGATGATCATGCTGAAGATGATGAAGGAGAAATGGTTGCTCCTCAGGCTCGTTATCCTTGGGAAGGAAGTGATCGTGATTATGAATATGAGGAGCTTCTTGGCAGGGTGTTTAACATTCTTCGTGAGAATAATCCTGAACTTGCTGGAGATAGGCGAAGGACAGTAATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAAAACTGTGTTTGTGAATTTTATGGATCTGTGCAAAACAATGCATCGGCAGCCAGACCATGTCATGGCTTTCTTGCTTGCTGAATTGGGTACAAGTGGATCCCTTGACGGACAGCAGAGATTGGTTGTAAAGGGAAGGTTTGCACCAAAGAACTTTGAAGGAATTCTGCGACGATATGTCAATGAGTATGTCATTTGCCTTGGATGCAAGAGCCCAGATACTATTCTTACGAAGGAGAATCGTCTCTTCTTTCTCCGGTGTGAGAAGTGTGGATCAGGAAGATCAGTTGCTCCAATCAAGGCTGGTTTTGTTGCTCGTGTTGGCCGAAGGAACACGGGTACATGA 807 0.4374 MADEAQNELKEEVPEIVPFDPTKKKKKKKITIVDPADDPVEKLAEKTDNLTVSDGVEAAFTGLKKKKKKPVEISNLNEDSGDAIEDLDDHAEDDEGEMVAPQARYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILTKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2546 268 SMART eIF2Bneu4 138 247 IPR002735 GO:0003743|GO:0006413
Pvu8g2546 268 Gene3D - 111 253 - -
Pvu8g2546 268 PANTHER BNAA02G05130D PROTEIN 1 266 - -
Pvu8g2546 268 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 266 IPR045196 GO:0003743|GO:0006413
Pvu8g2546 268 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 217 252 IPR016190 GO:0003743|GO:0006413
Pvu8g2546 268 MobiDBLite consensus disorder prediction 1 27 - -
Pvu8g2546 268 MobiDBLite consensus disorder prediction 1 22 - -
Pvu8g2546 268 Pfam Domain found in IF2B/IF5 137 246 IPR002735 GO:0003743|GO:0006413
Pvu8g2546 268 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 113 220 IPR016189 GO:0003743|GO:0006413
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2546 1 266 Eukaryotic Initiation Factors Gene Family AT5G20920 77.323 2.83e-140 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2546 K03238 - gmx:100783618 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2546 8 56097194 56101841 Pvu8g2546 8 56097194 56101841 ECH