Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2544 ATGGCAGATATTACTTCAAATTCAAGTGTCAATATCTCATACCTTATCACCAAAAAACTCTCCATGAAGTTCTACTTCCCTCGAGTGCATCCTTTCCTTTTCATAATTGTTATTCTCTGTCCTATGGTCTTTGCTGACTTAAGTTCTGACAAGCAAGCCCTTCTTGATTTTGCTGCCGCTGTTCCCCATCGCCGTGACCTTAAGTGGAATCCAGCTACTTCAATCTGTACATCGTGGGTAGGAGTCACATGCAATCCGAATGGCACCCGTGTTGTTTCTGTCCGGCTTCCTGGAATTGGACTAGTCGGCACCATTCCGGCCAATACACTTGGCAAGATTGACTCACTCAAAAACATCAGCCTCCGTGCCAACCTACTCAGTGGAAGTCTTCCTCCTGATATTTCTTCTCTTCCTTCCCTAGAATATCTTTACCTCCAGCATAATAACCTTTCTGGTAACATACCTACCTCATTGTCCACCCACCTCAATGTACTTGATCTGTCATACAATTGCTTCACCGGTGCTATTCCAAAGACATTACAAAACTTAACACAACTAACTAGGTTGAACCTCCAGAACAACTCCCTATCTGGTGAGATACCAAATCTCAATGTCACTAAGCTCAGGCACTTGAATTTAAGCTACAACCATTTGAATGGCTCTATCCCTGCTGCCCTTCAGACTTTCCCCAATTCTTCTTTTGAGGGCAATTCTCTATGTGGATTACCTCTAAAGTCATGCTCTTTAGTCCCCCCTGCACCTTCTCCATTAAGTCCTTCCCCACCAAGTCCTTCAAGACATAGCTCCAAAAGTAAATTGAGTAAGGCTGCTATCATTGCAATTGCAGTTGGTGGGGGTGTGCTATTATTACTTTTAGTAGCTCTCATCATTTTTCTGTGTTGTTTAAAGAAAAAGAATGACGGAAGCCCCAGAGCTACTAAAGGCAAGGGTCCTAGTGGTGGGAGAAGTGAGAAGCCAAAAGAAGAGTTTGGAAGTGGGGTGCAAGAACCTGAGAAAAACAAGTTGGTTTTCTTTGAGGGCAGTTCTTATAATTTTGATCTAGAGGATTTGCTGAGAGCTTCGGCTGAAGTTCTTGGAAAGGGTAGTTATGGTACTGCATATAAGGCTATATTGGAAGAGTCGACAACAGTTGTAGTGAAAAGGTTGAAGGAAGTTGTTGTAGGCAAAAGAGAATTTGAACAGCAGATGGAGATTGTGAGGAGAGTTGGACAGCACCCTAATGTTGTGCCACTTCGTGCTTACTATTATTCCAAGGATGAGAAGCTTTTGGTTTATGACTACATCCCAAATGGCAATCTATCAACCCTCTTGCATGGTAACAGGGCAAGTGGAAGAACTCCATTAGATTGGAACTCCCGAATAAAAATCTCTGTTGGAATTGCCAGAGGAATTGCTCACATACATTCAGTTGGTGGTCCAAAATTCACTCACGGAAATGTGAAATCCTCGAATGTCCTCCTGAACCAGGATAACGATGGCTGCATCTCTGACTTCGGCCTGACCCCACTTATGAATGTTCCTGCAACACCTTCTAGAGCTGCAGGCTATCGCGCCCCTGAGGTGATTGAAACTCGTAAGCACTCTCACAAGTCAGATGTGTACAGTTTTGGTGTTCTCCTTCTGGAAATGCTGACCGGAAAAGCGCCTCAACAGTCTCCAGGACGCGATGACATGGTTGATCTCCCAAGGTGGGTGCAGTCTGTTGTTAGGGAGGAGTGGACTGCTGAGGTTTTTGATGTGGAGCTAATGAGGTACCAAAACATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGCCATGGCCTGTGTGGCAAAGGTTCCAGATATGAGGCCTACCATGGAGGAAGTAGCGAGAATGATTGAAGAGATCCGGCTATCTGACTCCGAAAACCGGCCATCTTCAGAAGAGAATAGATCCAAGGAGGAATCAACTGCTCAAACTCCATAA 1968 0.4436 MADITSNSSVNISYLITKKLSMKFYFPRVHPFLFIIVILCPMVFADLSSDKQALLDFAAAVPHRRDLKWNPATSICTSWVGVTCNPNGTRVVSVRLPGIGLVGTIPANTLGKIDSLKNISLRANLLSGSLPPDISSLPSLEYLYLQHNNLSGNIPTSLSTHLNVLDLSYNCFTGAIPKTLQNLTQLTRLNLQNNSLSGEIPNLNVTKLRHLNLSYNHLNGSIPAALQTFPNSSFEGNSLCGLPLKSCSLVPPAPSPLSPSPPSPSRHSSKSKLSKAAIIAIAVGGGVLLLLLVALIIFLCCLKKKNDGSPRATKGKGPSGGRSEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESTTVVVKRLKEVVVGKREFEQQMEIVRRVGQHPNVVPLRAYYYSKDEKLLVYDYIPNGNLSTLLHGNRASGRTPLDWNSRIKISVGIARGIAHIHSVGGPKFTHGNVKSSNVLLNQDNDGCISDFGLTPLMNVPATPSRAAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPQQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKVPDMRPTMEEVARMIEEIRLSDSENRPSSEENRSKEESTAQTP* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2544 655 SUPERFAMILY Protein kinase-like (PK-like) 363 637 IPR011009 -
Pvu8g2544 655 SUPERFAMILY L domain-like 61 232 - -
Pvu8g2544 655 Gene3D Ribonuclease Inhibitor 47 203 IPR032675 -
Pvu8g2544 655 Pfam Leucine rich repeat 160 196 IPR001611 GO:0005515
Pvu8g2544 655 MobiDBLite consensus disorder prediction 629 655 - -
Pvu8g2544 655 ProSiteProfiles Protein kinase domain profile. 359 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2544 655 MobiDBLite consensus disorder prediction 318 335 - -
Pvu8g2544 655 MobiDBLite consensus disorder prediction 629 649 - -
Pvu8g2544 655 Pfam Leucine rich repeat N-terminal domain 48 85 IPR013210 -
Pvu8g2544 655 Gene3D Ribonuclease Inhibitor 204 248 IPR032675 -
Pvu8g2544 655 Gene3D Transferase(Phosphotransferase) domain 1 435 653 - -
Pvu8g2544 655 Pfam Leucine Rich Repeat 207 228 IPR001611 GO:0005515
Pvu8g2544 655 MobiDBLite consensus disorder prediction 308 335 - -
Pvu8g2544 655 Gene3D Phosphorylase Kinase; domain 1 327 434 - -
Pvu8g2544 655 PANTHER OS05G0588300 PROTEIN 15 655 - -
Pvu8g2544 655 PANTHER LRR RECEPTOR-LIKE KINASE 15 655 - -
Pvu8g2544 655 ProSitePatterns Protein kinases ATP-binding region signature. 365 396 IPR017441 GO:0005524
Pvu8g2544 655 CDD STKc_IRAK 365 630 - -
Pvu8g2544 655 ProSiteProfiles Leucine-rich repeat profile. 185 207 IPR001611 GO:0005515
Pvu8g2544 655 Pfam Protein kinase domain 362 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2544 Pvu-Chr8 56060979 56066448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2544 32 653 Receptor kinase-like Gene Family AT5G58300 68.680 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu8g2544 Pkinase 8.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2544 - - gmx:100818344 1060.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0840 6 19900674 19903222 Pvu8g2544 8 56060979 56066448 PCT