Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2541 ATGTATCTTTCAAAGGGTTGTAGGTGTGAAGTTGTTCTCTGTTTGTGGTTTTTCTGCTATTTCCTATTGGCTGCTAGTAAGGTCACTGACCCCACAGAAGTTGAGGCATTGAGAAGCATAAAGAGAAGTTTGTTTGATATTAATGGAAATTTGAGCAGATGGGATCGTGGAGACCCCTGTACATCCAACTGGACAGGGGTTATGTGCTCCAATACAACGTTAGCCGATGGCAATCTACATGTTCTACAATTGCAACTACTGAATTTGAACCTGTCTGGAACTTTGGCACCAGAGATCGGCAACTTATCTTATTTGGAAATACTGGACTTTATGTGGAATGACATAAGTGGGAGTATACCGAAGGAGATTGGCAATATCAAAACTTTGAAACTCTTACTTCTGAGTGGAAATAAACTAACAGGGGATCTTCCTGAAGAGCTTGGCCATCTTCCAGTGCTGGACAGAATACAAATTGATGAGAACAATATTACAGGATCCATACCATTATCATTTGCAAACCTGAACAGCACAGAACACTTCCACATGAACAACAATTCACTTAGTGGACAAATCCCAGCAGAGCTTTCCAAACTAGGAAGCCTTATTCACCTTCTTCTTGACAACAATAACTTGACAGGAAATCTCCCATCCGAGCTCTCTGAGACTCCAAGCTTAATGATACTTCAACTCGATAACAATAACTTCGATGGAAATAGCATACCAGAATCTTATGCCAACATGTCAAAATTGTTGAAATTAAGCCTTAGGAACTGCAACTTGAAAGGACCAATTCCTGATTTCAGCAGGATACCACACCTTACTTACCTTGACCTTAGTTTCAATCAGTTGAATGAATCAATTCCTACCAATAAGCTATCAGACAATATGACAACCATTGACTTATCAAACAACAAGCTCAATGGAACAATTCCAGCCTACTTTTCTGGTCTTCCACGTCTTCAGAAATTGTCAGTTGCAAACAATTCAATTAGTGGCACTGTTTCTTCTACCATTTGGCAGAACAGGACTTTAAATGCAACCGAGGAACTTATCTTGTACATGCAGCATAATCAACTTACAAGCATATCAGGCAGTACAAATCTTCCTCCAAATGTCACACTTATGCTTGAGGGAAATCCTGTATGTTCGAATAATAACTCCTTAGTTCAGTTCTGTGGACGTGAAAGTGATAATGACAAGGATGGAGGCTCCACTGTTGTCTGTCCAAGTCAAGGATGCCCCCCTCCTTATGAATACAATGTGGAGTGTATCTGTGCTGCCCCATTGATTGTTCATTATCGGTTGAAAAGTCCAGGTTTTTCAGATTTCCGTGCATATGTGAAAGAATTTGAGAACTTCCTGACAGATGGTCTTAGTGTGCATACTAATCAGCTGTTCATTGAGCGTTTTACATGGGAAGAAGGGCGGTTGAGAATGAACTTGAAGCTTTTTCCAGAATATGTTGACAATACAAGTTCTCGTGAGTTCAGTGCAAGTGAGGTTATTCGGATTAGGGACATGTTCAGAGAATGGGATATTCATGACAGTGACTTTTTTGGTCCTTACGAACTCTTGGACTTCATTCTACTTGATCTTTACAACGAGGCGATTACTCCCTCTTCAAGTTCAGGGATAAGCAAAGGTGCACTGGCTGGAATCATCTTAGGTGCAATTGCCTGTGCAGTTACATTATCTGCAATTGTTTCCATTCTTATTTTGAGAATACGCTTGAGAGATTATCGTGCACTTTCCAAGCGGCGTAACGCATCTAGGATCTTGCTAAAAGTTGAAGGTGTAAGATCATTTGATTACAAAGAAATGGCCTTGGCTACAAACAATTTTAGTGCGTCTGCTCAAATTGGAGAAGGGGGTTATGGGAAGGTTTATAAAGGTCGTCTTTCTGATGGCACTGTTGTTGCCATAAAACGTGCACAGGAGGGTTCACTGCAAGGTGAGAGGGAGTTCCTTACAGAAATAGAATTGCTATCAAGGCTACACCATCGCAACCTTGTGTCTCTAATTGGATACTGTGATGAAGAGGGTGAACAGATGTTAGTCTATGAATATATGCCAAATGGAACCCTAAGGGATCACCTTTCTGCTTATTCAAAAGATGTTCTTAGTTTTTCTCTAAGGTTAAAGATTGCTCTAGGATCAGCAAAAGGTCTTGTATATCTACACACAGAAGCTAATCCTCCAATATTCCACCGAGACGTGAAGGCGAGCAATATATTATTGGACTCTAGGTACACAGCAAAAGTTGCCGATTTTGGACTTTCACGACTTGCCCCAGTTCCAGATATTGAAGGAAATGTACCTGCTCATGTATCCACTGTGGTAAAGGGGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACACGTAATTTGACTGACAAAAGTGATGTTTACAGTCTGGGTGTTGTATTTTTGGAACTTTTGACTGGAAGGCCACCAATCTTTCATGGTGAAAATATAATTAGACAGGTTAATATGGCATACCAATCTGGTGGAATTTCTCTGGTTGTTGATAAACGTATTGAGTCTTATCCATTTGAGTATGCAGTGAGATTTTTGACTTTAGCCTTAAAGTGTTGCAAAGATTTACCAGATGAGAGGCCTAAAATGGCAGAAGTGGCTAGAGAGCTTGAATACATCTGTGCTATGTTACTTGAGCCAGATTCCAAGGGAGTTGAATATGTTACAAGTGATTCTTCTGGTACAATATTGAGTTCACAACCTTCATCATCTACTATAAACACTCCTTTTATTTCAGGAGATGTGTCAGGTAGTGACCTTGTCAGTGGAAGTGTACCAACCATCAAACCGAGATAG 2835 0.4042 MYLSKGCRCEVVLCLWFFCYFLLAASKVTDPTEVEALRSIKRSLFDINGNLSRWDRGDPCTSNWTGVMCSNTTLADGNLHVLQLQLLNLNLSGTLAPEIGNLSYLEILDFMWNDISGSIPKEIGNIKTLKLLLLSGNKLTGDLPEELGHLPVLDRIQIDENNITGSIPLSFANLNSTEHFHMNNNSLSGQIPAELSKLGSLIHLLLDNNNLTGNLPSELSETPSLMILQLDNNNFDGNSIPESYANMSKLLKLSLRNCNLKGPIPDFSRIPHLTYLDLSFNQLNESIPTNKLSDNMTTIDLSNNKLNGTIPAYFSGLPRLQKLSVANNSISGTVSSTIWQNRTLNATEELILYMQHNQLTSISGSTNLPPNVTLMLEGNPVCSNNNSLVQFCGRESDNDKDGGSTVVCPSQGCPPPYEYNVECICAAPLIVHYRLKSPGFSDFRAYVKEFENFLTDGLSVHTNQLFIERFTWEEGRLRMNLKLFPEYVDNTSSREFSASEVIRIRDMFREWDIHDSDFFGPYELLDFILLDLYNEAITPSSSSGISKGALAGIILGAIACAVTLSAIVSILILRIRLRDYRALSKRRNASRILLKVEGVRSFDYKEMALATNNFSASAQIGEGGYGKVYKGRLSDGTVVAIKRAQEGSLQGEREFLTEIELLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPNGTLRDHLSAYSKDVLSFSLRLKIALGSAKGLVYLHTEANPPIFHRDVKASNILLDSRYTAKVADFGLSRLAPVPDIEGNVPAHVSTVVKGTPGYLDPEYFLTRNLTDKSDVYSLGVVFLELLTGRPPIFHGENIIRQVNMAYQSGGISLVVDKRIESYPFEYAVRFLTLALKCCKDLPDERPKMAEVARELEYICAMLLEPDSKGVEYVTSDSSGTILSSQPSSSTINTPFISGDVSGSDLVSGSVPTIKPR* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2541 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 734 746 IPR008271 GO:0004672|GO:0006468
Pvu8g2541 944 MobiDBLite consensus disorder prediction 921 944 - -
Pvu8g2541 944 ProSiteProfiles Protein kinase domain profile. 614 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2541 944 Gene3D Ribonuclease Inhibitor 191 294 IPR032675 -
Pvu8g2541 944 MobiDBLite consensus disorder prediction 921 936 - -
Pvu8g2541 944 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Pvu8g2541 944 SMART serkin_6 614 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2541 944 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 920 - -
Pvu8g2541 944 Gene3D Transferase(Phosphotransferase) domain 1 690 896 - -
Pvu8g2541 944 CDD STKc_IRAK 620 884 - -
Pvu8g2541 944 ProSitePatterns Protein kinases ATP-binding region signature. 620 642 IPR017441 GO:0005524
Pvu8g2541 944 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 13 920 - -
Pvu8g2541 944 Gene3D Phosphorylase Kinase; domain 1 585 689 - -
Pvu8g2541 944 SUPERFAMILY Protein kinase-like (PK-like) 599 905 IPR011009 -
Pvu8g2541 944 SUPERFAMILY L domain-like 45 387 - -
Pvu8g2541 944 Gene3D Ribonuclease Inhibitor 295 413 IPR032675 -
Pvu8g2541 944 Pfam Protein kinase domain 616 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2541 944 Gene3D Ribonuclease Inhibitor 30 190 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2541 Pvu-Chr8 56004632 56015286 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2541 19 884 Receptor kinase-like Gene Family AT5G01950 57.614 0.0 950
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pvu8g2541 Pkinase 7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2541 - - gmx:100801035 1457.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0843 6 19953718 19967156 Pvu8g2541 8 56004632 56015286 PCT