Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu8g2541 | ATGTATCTTTCAAAGGGTTGTAGGTGTGAAGTTGTTCTCTGTTTGTGGTTTTTCTGCTATTTCCTATTGGCTGCTAGTAAGGTCACTGACCCCACAGAAGTTGAGGCATTGAGAAGCATAAAGAGAAGTTTGTTTGATATTAATGGAAATTTGAGCAGATGGGATCGTGGAGACCCCTGTACATCCAACTGGACAGGGGTTATGTGCTCCAATACAACGTTAGCCGATGGCAATCTACATGTTCTACAATTGCAACTACTGAATTTGAACCTGTCTGGAACTTTGGCACCAGAGATCGGCAACTTATCTTATTTGGAAATACTGGACTTTATGTGGAATGACATAAGTGGGAGTATACCGAAGGAGATTGGCAATATCAAAACTTTGAAACTCTTACTTCTGAGTGGAAATAAACTAACAGGGGATCTTCCTGAAGAGCTTGGCCATCTTCCAGTGCTGGACAGAATACAAATTGATGAGAACAATATTACAGGATCCATACCATTATCATTTGCAAACCTGAACAGCACAGAACACTTCCACATGAACAACAATTCACTTAGTGGACAAATCCCAGCAGAGCTTTCCAAACTAGGAAGCCTTATTCACCTTCTTCTTGACAACAATAACTTGACAGGAAATCTCCCATCCGAGCTCTCTGAGACTCCAAGCTTAATGATACTTCAACTCGATAACAATAACTTCGATGGAAATAGCATACCAGAATCTTATGCCAACATGTCAAAATTGTTGAAATTAAGCCTTAGGAACTGCAACTTGAAAGGACCAATTCCTGATTTCAGCAGGATACCACACCTTACTTACCTTGACCTTAGTTTCAATCAGTTGAATGAATCAATTCCTACCAATAAGCTATCAGACAATATGACAACCATTGACTTATCAAACAACAAGCTCAATGGAACAATTCCAGCCTACTTTTCTGGTCTTCCACGTCTTCAGAAATTGTCAGTTGCAAACAATTCAATTAGTGGCACTGTTTCTTCTACCATTTGGCAGAACAGGACTTTAAATGCAACCGAGGAACTTATCTTGTACATGCAGCATAATCAACTTACAAGCATATCAGGCAGTACAAATCTTCCTCCAAATGTCACACTTATGCTTGAGGGAAATCCTGTATGTTCGAATAATAACTCCTTAGTTCAGTTCTGTGGACGTGAAAGTGATAATGACAAGGATGGAGGCTCCACTGTTGTCTGTCCAAGTCAAGGATGCCCCCCTCCTTATGAATACAATGTGGAGTGTATCTGTGCTGCCCCATTGATTGTTCATTATCGGTTGAAAAGTCCAGGTTTTTCAGATTTCCGTGCATATGTGAAAGAATTTGAGAACTTCCTGACAGATGGTCTTAGTGTGCATACTAATCAGCTGTTCATTGAGCGTTTTACATGGGAAGAAGGGCGGTTGAGAATGAACTTGAAGCTTTTTCCAGAATATGTTGACAATACAAGTTCTCGTGAGTTCAGTGCAAGTGAGGTTATTCGGATTAGGGACATGTTCAGAGAATGGGATATTCATGACAGTGACTTTTTTGGTCCTTACGAACTCTTGGACTTCATTCTACTTGATCTTTACAACGAGGCGATTACTCCCTCTTCAAGTTCAGGGATAAGCAAAGGTGCACTGGCTGGAATCATCTTAGGTGCAATTGCCTGTGCAGTTACATTATCTGCAATTGTTTCCATTCTTATTTTGAGAATACGCTTGAGAGATTATCGTGCACTTTCCAAGCGGCGTAACGCATCTAGGATCTTGCTAAAAGTTGAAGGTGTAAGATCATTTGATTACAAAGAAATGGCCTTGGCTACAAACAATTTTAGTGCGTCTGCTCAAATTGGAGAAGGGGGTTATGGGAAGGTTTATAAAGGTCGTCTTTCTGATGGCACTGTTGTTGCCATAAAACGTGCACAGGAGGGTTCACTGCAAGGTGAGAGGGAGTTCCTTACAGAAATAGAATTGCTATCAAGGCTACACCATCGCAACCTTGTGTCTCTAATTGGATACTGTGATGAAGAGGGTGAACAGATGTTAGTCTATGAATATATGCCAAATGGAACCCTAAGGGATCACCTTTCTGCTTATTCAAAAGATGTTCTTAGTTTTTCTCTAAGGTTAAAGATTGCTCTAGGATCAGCAAAAGGTCTTGTATATCTACACACAGAAGCTAATCCTCCAATATTCCACCGAGACGTGAAGGCGAGCAATATATTATTGGACTCTAGGTACACAGCAAAAGTTGCCGATTTTGGACTTTCACGACTTGCCCCAGTTCCAGATATTGAAGGAAATGTACCTGCTCATGTATCCACTGTGGTAAAGGGGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACACGTAATTTGACTGACAAAAGTGATGTTTACAGTCTGGGTGTTGTATTTTTGGAACTTTTGACTGGAAGGCCACCAATCTTTCATGGTGAAAATATAATTAGACAGGTTAATATGGCATACCAATCTGGTGGAATTTCTCTGGTTGTTGATAAACGTATTGAGTCTTATCCATTTGAGTATGCAGTGAGATTTTTGACTTTAGCCTTAAAGTGTTGCAAAGATTTACCAGATGAGAGGCCTAAAATGGCAGAAGTGGCTAGAGAGCTTGAATACATCTGTGCTATGTTACTTGAGCCAGATTCCAAGGGAGTTGAATATGTTACAAGTGATTCTTCTGGTACAATATTGAGTTCACAACCTTCATCATCTACTATAAACACTCCTTTTATTTCAGGAGATGTGTCAGGTAGTGACCTTGTCAGTGGAAGTGTACCAACCATCAAACCGAGATAG | 2835 | 0.4042 | MYLSKGCRCEVVLCLWFFCYFLLAASKVTDPTEVEALRSIKRSLFDINGNLSRWDRGDPCTSNWTGVMCSNTTLADGNLHVLQLQLLNLNLSGTLAPEIGNLSYLEILDFMWNDISGSIPKEIGNIKTLKLLLLSGNKLTGDLPEELGHLPVLDRIQIDENNITGSIPLSFANLNSTEHFHMNNNSLSGQIPAELSKLGSLIHLLLDNNNLTGNLPSELSETPSLMILQLDNNNFDGNSIPESYANMSKLLKLSLRNCNLKGPIPDFSRIPHLTYLDLSFNQLNESIPTNKLSDNMTTIDLSNNKLNGTIPAYFSGLPRLQKLSVANNSISGTVSSTIWQNRTLNATEELILYMQHNQLTSISGSTNLPPNVTLMLEGNPVCSNNNSLVQFCGRESDNDKDGGSTVVCPSQGCPPPYEYNVECICAAPLIVHYRLKSPGFSDFRAYVKEFENFLTDGLSVHTNQLFIERFTWEEGRLRMNLKLFPEYVDNTSSREFSASEVIRIRDMFREWDIHDSDFFGPYELLDFILLDLYNEAITPSSSSGISKGALAGIILGAIACAVTLSAIVSILILRIRLRDYRALSKRRNASRILLKVEGVRSFDYKEMALATNNFSASAQIGEGGYGKVYKGRLSDGTVVAIKRAQEGSLQGEREFLTEIELLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPNGTLRDHLSAYSKDVLSFSLRLKIALGSAKGLVYLHTEANPPIFHRDVKASNILLDSRYTAKVADFGLSRLAPVPDIEGNVPAHVSTVVKGTPGYLDPEYFLTRNLTDKSDVYSLGVVFLELLTGRPPIFHGENIIRQVNMAYQSGGISLVVDKRIESYPFEYAVRFLTLALKCCKDLPDERPKMAEVARELEYICAMLLEPDSKGVEYVTSDSSGTILSSQPSSSTINTPFISGDVSGSDLVSGSVPTIKPR* | 945 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu8g2541 | 944 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 734 | 746 | IPR008271 | GO:0004672|GO:0006468 | |
Pvu8g2541 | 944 | MobiDBLite | consensus disorder prediction | 921 | 944 | - | - | |
Pvu8g2541 | 944 | ProSiteProfiles | Protein kinase domain profile. | 614 | 886 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu8g2541 | 944 | Gene3D | Ribonuclease Inhibitor | 191 | 294 | IPR032675 | - | |
Pvu8g2541 | 944 | MobiDBLite | consensus disorder prediction | 921 | 936 | - | - | |
Pvu8g2541 | 944 | Pfam | Leucine rich repeat N-terminal domain | 31 | 70 | IPR013210 | - | |
Pvu8g2541 | 944 | SMART | serkin_6 | 614 | 886 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu8g2541 | 944 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 13 | 920 | - | - | |
Pvu8g2541 | 944 | Gene3D | Transferase(Phosphotransferase) domain 1 | 690 | 896 | - | - | |
Pvu8g2541 | 944 | CDD | STKc_IRAK | 620 | 884 | - | - | |
Pvu8g2541 | 944 | ProSitePatterns | Protein kinases ATP-binding region signature. | 620 | 642 | IPR017441 | GO:0005524 | |
Pvu8g2541 | 944 | PANTHER | LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN | 13 | 920 | - | - | |
Pvu8g2541 | 944 | Gene3D | Phosphorylase Kinase; domain 1 | 585 | 689 | - | - | |
Pvu8g2541 | 944 | SUPERFAMILY | Protein kinase-like (PK-like) | 599 | 905 | IPR011009 | - | |
Pvu8g2541 | 944 | SUPERFAMILY | L domain-like | 45 | 387 | - | - | |
Pvu8g2541 | 944 | Gene3D | Ribonuclease Inhibitor | 295 | 413 | IPR032675 | - | |
Pvu8g2541 | 944 | Pfam | Protein kinase domain | 616 | 880 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu8g2541 | 944 | Gene3D | Ribonuclease Inhibitor | 30 | 190 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu8g2541 | Pvu-Chr8 | 56004632 | 56015286 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu8g2541 | 19 | 884 | Receptor kinase-like Gene Family | AT5G01950 | 57.614 | 0.0 | 950 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VIII-1 | Pvu8g2541 | Pkinase | 7e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu8g2541 | - | - | gmx:100801035 | 1457.2 |