Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2537 TTCTTGATCAAGAGTTCATTTTGTTTCTACGAAAGTTGCTACAACTGCCACTGCCTCCGCTGCTTCTCCTTATTTTGTTCTATACCGTACGAGATTCTTCTGTTCACGCTTCTCTGCTATTTTGTTGTCACTCTTGTCGTTGCTCTTGCCTCCATTGTCGTCACAGCTCCGTTCACGCTACAGATTGCAGAATATGCAATAGTTCCAATTTTAGACCATGCTAAATACTTGTGTTGTTTACACAACTTTGCTTTGAATCTTCCAAATGCTAAAAAACAACTGGAATTGACTCGAGAGAGTGTGAATGAGCAAATTAGAGAAGCCACTAATATGATTGAAAAAGTTAATCCAGCTGTTGAGGAGTGGCTAAAAGATGTCAATAAAGTCTTAGATGAAGTAAAACTGCTCGAAGAGAGAATATTGAATGTAAACAAGAGTTGTTTGAGAAGGCAATGTCAATATTCTCTTGCAAAAAATATAGCAAGAAAAACAACTAAAATGATTCAGCTCCATCGTGATAGCAAGTTTGAACCGTTTTCTACAACTATTGAACTTCCAGGCATGAAGTACTATTCTTCCAATGATTTCATTATGTTCAAATCTACAGAAGCATCGTACAACAAACTTATAGAAACATTAAAGAATAAAAGTGTTTCCATGATTGGGTTAGTTGGATTAGGAGGCTCAGGAAAAACTACTTTGGCAAAAGAAGTGGGTAAAAAGGCTGAAGAGATGAAACTCTTTGAGAAGGTTGTCATGGCAACGGTGTCTCAACCACCAAATATCATAAGTATACAAGATCAGGTTGTCGACCAATTGAGTTTCCCATTAAATGAAACATCAGATATAGGTAGAGCACAAAGACTATCAGAGAGATTAAGGAAAGGTACAACTCTTTTAATCTTGGATGATGTATGGGAAAAACTAAACTTTGAAGCTTTAGGTATTCCATTTGATGAAAATGGTAAGGCTTGTTGTATACTTATGACAACTCGAAGTAAAGAAGTATGCACTTCTATGCAATGTCAAAGCATAGTTGAACTTAATCTCTTGAGTGACAAAGAAGCATGGACTTTGTTCACACATTATGCAAACATAATTGATGTCTCCTCGGAAGCTTTGAAAGGTGTGGCAAGAAAAGTTGTTAATGAATGTAAGGGATTGCCCATTGCAATTGCCACGGTGGGAAGCACACTAAAGGAAAAAACTATTGAAGATTTTGAGTTTGCATTATCAAGGCTAGAAAATTCTAGGCCACTAGATATTCCAAAAGGCTTAAGAAGTCCTTATGTTTGCCTTGAATTAAGTTACAATAATTTGACAAATCAATTAGCTCAATCCTTGTTAATGTTGTGTTCTATGTTTCCAGAGGATTGTGAAATAGATTTGGAAGATTTATTCCGATTTGGAAGACGATTTGGAACAGGTTGGACATTTGGAATAATGGAGAATGCAAGGAGAGAGATGCATGCAGCTATTAACATTCTCAAGAATTGTTGTTTGTTAATGCAAGCCAAAAAAAAAGATAAGGTAAAATTGCATGATTTGGTTCGTGATGTAGCCTTGTGGATTGCGTCTAAAAGTGGTCAAACAATTTTCACACGTACTGAAGTGGACCTGGGAGTGTTGACAGATGATGAAATCATGAAAGATACGCATGCATTAGCCTTATGGAATATGAAAGGAAATGATTTTCTTAATTATAAAATAAAATTTCCAACACTTGAAATTCTCTTGCTTTGTTCTAAAGGTGGCATAAAAGTACCAGATGTGTGTTCTGAAAGCTTGGAAAAACTTAAAACCTTAGTAATCATAAATTTACATGAGCGGGGTAGAGCTGTTTTTCCTTTGCCAGAGTCACTGAAGTCGTTAAAAAATCTTCGAACACTATGCTTGAGAAATCATGATTTGGGTGACATATCTTTTGTGGAAAGACTGCAAACACTTGAGATTCTTGACTTGCATGGCTCTTCTTTTGAAGAATTTCCTGTTGGGATAGTAGAATTAAAGAAGTTGAAGCTTCTAGATTTGTTCGAATGTCGGCTTAAGAAAAATATAGTTGATGAAGTTAGGTATGCTATAATAAATTGTCATTCTTCTAGGCCTTGGGAAGTCCCAACCCTGAAGAAATATGCAAAGTCTAGAGGTTTATTAATACATGATTTTGACGTTACTGTTCAAAAATTTATATCATTACCAATCAAGGATCTCTTTATAAGAGCAGAGTTCCTTAATTTGATAAACCTTCAGGGAGATTTTAAAAATATAATCCCATCCATGGATCCACAAGGCATGAATCACTTGATTACCCTAGAACTCCTATATGTACTCTCTAAACTTGTTTACCTAAGTTTGAAATGGTTATGTAGCCTTCTAGAGGTTTTTTGTGATCCCTCATCGCGATGTTCCCTTGAAAATTTAGGAGAGCTCTTGATAAAAGATTGTGGAAAACTGAACAGCATCTCCTTTCCAAGGAAGTCTAAGCTATGCAATCTGAAGATCCTTTCAATATATGATTGTCCTATGCTAACTTCTCTCTTCGTGCCATCCGTTGTCCAATCTCTAGTGTTGTTAGAGGAACTAAAAATAATTGACTGCAACGGATTGAGGCACATAATAGAAGAAGTGGAAGAAGGGAACAATGTTTTTTCAAGCACCCCAAGTCATTCATATTTGACGCTCCAAAAATTAAGGATTATTAATATTATAGAATGCAACAATTTGGAGTACATATTCTCTGAGAATTTAACCGTACGGCTAGTGATTTTGGAAAGTGTGAACATTCGAGAAAACTCGAAATTGAAGTATGTATTTGGAAGTGGAAAGGAACCTAATCATGCAGTTTACCCAAGTGAAAAAGAGACTAATATCATAAATTTTTCTAATTTGCATACTCTATGGTTGTCATCTTTACCAAATGTGATTGACATTTGGCCTCAATATTGTCGTCCACAACTCCCCAATCTTAAGAACTTAGAGTGCATTGATTGTCCCAAATTGCTTGAGTCTTCCATAAGTAAGATGATGACTGCTTCAAATCTCCCGCAAGAAACAACTTCAAAGGATAATCAAATACCATGGTTTCCACTCCAACTTGAAAGGCTTTGCTTTTCTGATGTTAGAGTAAAAGGTCTGTTCCAATTCCAAATGGGAGAAGAAGGGGGCAGTGGAGAACTTCTTCCTCTAAACTTGGATATAACTTCTCTAGAGTTGACAGACTTACCTGAGCTGAACTTTATATGGAAGGGCCCCACAGGTTTTCTAAACCTCCAAAAGCTTCAAGAAGTTCAAGTGAGCGGATGTCCAAAATTGAAAACCATCTTCTCCATCACTGTTGTTACAAGTTTACCAATGCTGAAAGAACTGTATATAAATAACTGTAATGAATTGGAACAAATATTTGATTTAGGTGATGCACGACAACTCCAAACCCTGTATTCTTCCCAACAACTCTGCTTCCCAACACTTTATTTCATTTCAGTTAAAAAGTGCAATAAGTTGAAATGTCTTTTTTATAAGCTATCGGCTAGTCATTTTACCACTCTGAAATATTTGGAAATAGAAGAGTGCTCTGAGTTACACAAGGCTTTTGGTTTTGAACATGAAGCTGATGATGGTGGTGAAGAACAGACGGCTAAAAAGGGAGAACAACTACTACTACAGGAACTGAGAAGTATTACACTCAAAAAATTGCCAAACTTCGTAGAGATTCACCACGGATTTAAGTTAAAAGAAAATGTTGACCGTCATACCGTGGAGGAATGTCCTAAGTATTCTTCAAGTTTATATCTGCATACAGAACAAAGTGGAAAATATAAGGAATGGCAATGTGGTATCCTCGAAATAAAGAAAAGGGAAATTGAGAAAATGATAAGAGTTTCCCAAAACAATTTGGACATCAGCCTTATGCAACAGCTAGCATACTAG 3927 0.3616 FLIKSSFCFYESCYNCHCLRCFSLFCSIPYEILLFTLLCYFVVTLVVALASIVVTAPFTLQIAEYAIVPILDHAKYLCCLHNFALNLPNAKKQLELTRESVNEQIREATNMIEKVNPAVEEWLKDVNKVLDEVKLLEERILNVNKSCLRRQCQYSLAKNIARKTTKMIQLHRDSKFEPFSTTIELPGMKYYSSNDFIMFKSTEASYNKLIETLKNKSVSMIGLVGLGGSGKTTLAKEVGKKAEEMKLFEKVVMATVSQPPNIISIQDQVVDQLSFPLNETSDIGRAQRLSERLRKGTTLLILDDVWEKLNFEALGIPFDENGKACCILMTTRSKEVCTSMQCQSIVELNLLSDKEAWTLFTHYANIIDVSSEALKGVARKVVNECKGLPIAIATVGSTLKEKTIEDFEFALSRLENSRPLDIPKGLRSPYVCLELSYNNLTNQLAQSLLMLCSMFPEDCEIDLEDLFRFGRRFGTGWTFGIMENARREMHAAINILKNCCLLMQAKKKDKVKLHDLVRDVALWIASKSGQTIFTRTEVDLGVLTDDEIMKDTHALALWNMKGNDFLNYKIKFPTLEILLLCSKGGIKVPDVCSESLEKLKTLVIINLHERGRAVFPLPESLKSLKNLRTLCLRNHDLGDISFVERLQTLEILDLHGSSFEEFPVGIVELKKLKLLDLFECRLKKNIVDEVRYAIINCHSSRPWEVPTLKKYAKSRGLLIHDFDVTVQKFISLPIKDLFIRAEFLNLINLQGDFKNIIPSMDPQGMNHLITLELLYVLSKLVYLSLKWLCSLLEVFCDPSSRCSLENLGELLIKDCGKLNSISFPRKSKLCNLKILSIYDCPMLTSLFVPSVVQSLVLLEELKIIDCNGLRHIIEEVEEGNNVFSSTPSHSYLTLQKLRIINIIECNNLEYIFSENLTVRLVILESVNIRENSKLKYVFGSGKEPNHAVYPSEKETNIINFSNLHTLWLSSLPNVIDIWPQYCRPQLPNLKNLECIDCPKLLESSISKMMTASNLPQETTSKDNQIPWFPLQLERLCFSDVRVKGLFQFQMGEEGGSGELLPLNLDITSLELTDLPELNFIWKGPTGFLNLQKLQEVQVSGCPKLKTIFSITVVTSLPMLKELYINNCNELEQIFDLGDARQLQTLYSSQQLCFPTLYFISVKKCNKLKCLFYKLSASHFTTLKYLEIEECSELHKAFGFEHEADDGGEEQTAKKGEQLLLQELRSITLKKLPNFVEIHHGFKLKENVDRHTVEECPKYSSSLYLHTEQSGKYKEWQCGILEIKKREIEKMIRVSQNNLDISLMQQLAY* 1309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2537 1308 SUPERFAMILY RNI-like 1031 1191 - -
Pvu8g2537 1308 Pfam NB-ARC domain 203 438 IPR002182 GO:0043531
Pvu8g2537 1308 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 449 IPR027417 -
Pvu8g2537 1308 SUPERFAMILY L domain-like 512 1010 - -
Pvu8g2537 1308 PRINTS Disease resistance protein signature 220 235 - -
Pvu8g2537 1308 PRINTS Disease resistance protein signature 292 306 - -
Pvu8g2537 1308 PRINTS Disease resistance protein signature 385 399 - -
Pvu8g2537 1308 PRINTS Disease resistance protein signature 667 683 - -
Pvu8g2537 1308 Coils Coil 119 139 - -
Pvu8g2537 1308 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 57 686 - -
Pvu8g2537 1308 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 883 1133 - -
Pvu8g2537 1308 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 799 875 - -
Pvu8g2537 1308 SMART AAA_5 217 350 IPR003593 -
Pvu8g2537 1308 Coils Coil 91 111 - -
Pvu8g2537 1308 Gene3D Ribonuclease Inhibitor 1030 1156 IPR032675 -
Pvu8g2537 1308 Gene3D - 436 522 IPR036388 -
Pvu8g2537 1308 Gene3D Ribonuclease Inhibitor 729 1024 IPR032675 -
Pvu8g2537 1308 Gene3D Ribonuclease Inhibitor 526 700 IPR032675 -
Pvu8g2537 1308 Gene3D - 192 348 IPR027417 -
Pvu8g2537 1308 Gene3D - 350 435 IPR042197 -
Pvu8g2537 1308 PANTHER - 57 686 - -
Pvu8g2537 1308 PANTHER - 799 875 - -
Pvu8g2537 1308 PANTHER - 883 1133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2537 Pvu-Chr8 55962918 55970590 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2537 206 538 WRKY Transcription Factor Family AT5G45050 23.392 1.71e-14 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2537 - - pvu:PHAVU_008G245200g 2555.78