Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2536 ATGGAGGACTTCTTTCTTTCTATCGCAACAAAGACGGTAGAATATGCAATATTTCCGATTTTAGATCATTTGCAATACTTATGTTGTTTCCACAACTTTGCTTCGAATCTTCCAAATGCCAAAGAAGAACTGGAATTGACTCGAGAGAGTGTGATTGAGCGAATTAGAGAAGCCACTAATAAGACTGAAAAAGTTAAACCAGCTGTTGAGAAGTGGCTAAAAGATGTTGAGAAAGTCTTAAATGAAGTACAACTGCTGGAAGAAAGAATATCAAATGTAAAGAAGAGCTACTTCAGAAGGCAATGTCAATATTCTCTTGCAAAAGAAATAGCAAGAAAAACAACTCAAATGATTCAGCTTCATCATGATAGAAGGTTTGAACAATTTTCTACGATTATTGAACTTCCAGGCATGAAGTACTATTCTTCCAATGATTTCATTATGTTCAAATCTACAGAAGCATCATACAACAAGCTTATAGAAACATTAAAGAATAAATGTGTTTCCATGATTGGGTTAGTTGGATTAGGAGGCTCAGGGAAAACTACTTTAGCAAAAGAAGTGGGTAAAAAGGCAGAAGAGATGAAACTCTTTGAGAAGGTTGTCATGGCAACGGTGTCTCAACCACCAAATATCATAAGTATACAAGATCAGATTGGCGACCAATTGAGTTTACCGTTAAATGAAAAATCAAATATAGGTAGAGCACAAAGACTATCAGAGAGATTAAAGATAGGTACAACTCTTTTAATCTTGGATGATGTATGGGAAAAGCTAAACTTTGAAGCTTTAGGTATTCCATTTGATGAAAGCTGCAAGACTTGTTGCGTACTCATAACAACTCGCAATAAAGAAGTATGCACTTCTATGCAATGTCAAAGTATAATTGAACTTAATCTCTTGAGTGACAATGAAGCATGGACTTTGTTCACACATTATGCAAGTATAACTGATGTCTCCTTTGAAGCTTTGAAAGATGTGACAAGAAAAATTATTAATGAATGTAAGGGATTGCCCATTGCAATTGTGACTGTAGCAAGCTCGCTAAAGGGGAAAACTATTGAAGGTTTTGAGTTAGCATTGTCAAGGCTAGAAAATTCCAAGCCACTAGATGTTCCAAAAGGCTTAATAAGTCCTTATGTTTGTCTTGAATTAAGTTACAATAATTTGACAAACCAATTGGCTCAATCTTTATTGTTGTTGTGTTCTATGTTTCCAGAGGATTATGAAATAGATTTGGAAGATTTATTTCGATTTGGAAGAGGATTTTGCACAGTTGGGACGTTTGGAACAATGGAGAATGCAAGGAGAGAGATGCATGAAGCCATTGACATTCTTAAGAGTTGTTTTTTGTTAATGCATGTCGGAACAAAAGAAAATGTAAAAATGCATGATTTGGTTCGTGATGTAGCCTTGTGGATTGCCGCTAAAAGTGGTCAAGCAATTTTCACACGTACTGGAGTGGGTCTGGAAGTGTTGACAAATGATGAAATCATGAAAGATACGAAAGCATTAGCCTTATGGAATATAAGAGCATATGATTCTCTTAATTATAAAATAAATTGTCCAACACTTGAAATTCTCTTGCTTTGTTATCGTGGTGGCATGAATGTACCAGATGTGTGTTCTCAAAGCTTGGAAAAATTTAAAACCTTAATCATAAATTCATTAACGAAAAGTTATGGGTTACTTTTGCCAGAGTCACTGAAGTCGTTAAAAAATCTTCGAACACTGTGCTTGAGAAATCATGATTTAGGTGACATATCTTTTGTGGAAAGACTGCAAGTACTTGAGATTCTTGACTTGCATGGCTCTTCTTTTGAAGAATTTCCTGTTGGGATTGTAGAATTAAAGAAGTTGAAGCTTCTAGATTTGTTCCAATGTCGGCTTAAGAAAAATATAGTTGATGAAGTTTACGAAGTTGTAAGCAAATGTTTGCAGCTAGAGGAATTGTATTTGTACTTGGTCAATTACAAAAAGGACTTTTCACATGATGTCTCTTTCCCCAAATTACAGAGGTATGCTATAATAAACATCAATGATTATCTTAAGGTTTGGCGTATCATAACTATGAAAAAATACGCACAGTCTAGAGGTTTATTTATAGATGAGTTTGATGTTACTGCTGAAAATTTTATGTCGTTACCAATCAAGGATCTCTTTATAAGAGCAGAGTTCCTTCATTTGAGAAACCTTCGGGGAGATTTTAAAAATATAATCCCATCCATGGATCCACAAGGCATGAATCACTTGATTACCCTACAACTCGTATGTTGTGAAAAGATAGAATGTCTCATTGATAACACTATGAATACCTACAATAGTGTATTCTCTAAACTTGTTTACTTAAGGTTGGAAAGGTTATGTAGCCTTCGAGAGTTCTTTTGTGATCCTTCTTCGCGATGTTTTCTCAAAAATTTAGGTGAGCTCTTGATAAAAGATTGTAGTAAATTGAGCAGTATATCATTTTCAAGGAAGTCTAAACTATGCAATTTGAAGGTCCTTTCAATATACAGTTGTCCTGTGCTAACTTCTCTCTTCGTGCCATCCATTGCCGAATCTCTAGTGTTGTTAGAAGAACTAAAAATAATTAACTGCAACGCCTTGAGGCACATAATAGATGAAGTGGAAGAAGGGAACGATGTTCTTTCAAGCACCTCAAGTCATTCATATTTGACGCTCCAAAAATTAAGGATTATTGAAATTTATGGATGCAACAATTTGAAGTACATATTCTCTGAGAATTTAGCCGTAGGGCTAATGAGTTTGGAAAGTGTGGACATTCAAAGATGCTTGGAATTGAAGTATGTATTTAATAGTGAAAAGAAACGTAATCCTGCAGTTTACCCAAGTGAAAAGGAGACTAATATCATAAATTTTTCTAATTTGCATGTTCTAAGATTGTTATATTTACCAAATGTGATTGACATTTGGCCTGAAAATTGTCGTCCACAACTCCCCAGTCTTAAAAGGATAGAATACTATGAATGTCCCAAATTGCTTAACTCTTCCATAAGTAAGATGACTGCTCCAAATCTCCCGCAAAACACAACTTCAAAGGAGAATGAAATAGCATGGTTCATTACCAACACATTCATCCAAATGGACGCTCTGTTGTTTCCACTCCAACTTGAATTGCTTTGGTTGTCTGATGTTAGAGTAAAAGGTCTGTTCCAAATCCAAATGGGAGAAGAAGGGGGTAGTGGAGAACTGCTTCCTTTAAACTTGGATATAAATTATCTAGAATTGAAGAATCTACCTGAGCTCAACTTCCTATGGAAGGGCCCCACAGGTTTTCTAAGCCTCCAAAAGCTTGCAATTGTTCACATATATGAATGTCCAAAATTGAAAACCATCTTCTCCATCACTGTTGTTACAAGTTTACCAATGCTGCGAGAACTGGGTATAAATAACTGTGATGAATTGGAACAAATATTTGATTTAGGTGATGCACAACAACTCCAAACCCTATATTCTTCCCAACAACTCTGCTTCCCAAAACTCAAATACATTACAGTTAAAAAGTGCAATAAGTTGAAATGTCTTTTTTATAATCTATCGGCTAGTCATTTTACCAGTATGAAATATTTGACAATAGAAAAGTGCTCTCAGTTACACAAGGCTTTTGGTTTTGAAAATGAAGCTGATGGTGGTGGTGAAGAAGAGACGGCTAAAAAGGGAGAACAAGTAGTACTACTGAAACTGACAGATATAACACTAAAAAATTTGCCAAACTTCGAAGAGATTCACCACGGATTTATGTTAAAAGAAAATCTTAACTGTCATATCAGGGAGGAATGTCCTAAGTATTCTCCAAGTTTATATCTAGATCCA 3834 0.3524 MEDFFLSIATKTVEYAIFPILDHLQYLCCFHNFASNLPNAKEELELTRESVIERIREATNKTEKVKPAVEKWLKDVEKVLNEVQLLEERISNVKKSYFRRQCQYSLAKEIARKTTQMIQLHHDRRFEQFSTIIELPGMKYYSSNDFIMFKSTEASYNKLIETLKNKCVSMIGLVGLGGSGKTTLAKEVGKKAEEMKLFEKVVMATVSQPPNIISIQDQIGDQLSLPLNEKSNIGRAQRLSERLKIGTTLLILDDVWEKLNFEALGIPFDESCKTCCVLITTRNKEVCTSMQCQSIIELNLLSDNEAWTLFTHYASITDVSFEALKDVTRKIINECKGLPIAIVTVASSLKGKTIEGFELALSRLENSKPLDVPKGLISPYVCLELSYNNLTNQLAQSLLLLCSMFPEDYEIDLEDLFRFGRGFCTVGTFGTMENARREMHEAIDILKSCFLLMHVGTKENVKMHDLVRDVALWIAAKSGQAIFTRTGVGLEVLTNDEIMKDTKALALWNIRAYDSLNYKINCPTLEILLLCYRGGMNVPDVCSQSLEKFKTLIINSLTKSYGLLLPESLKSLKNLRTLCLRNHDLGDISFVERLQVLEILDLHGSSFEEFPVGIVELKKLKLLDLFQCRLKKNIVDEVYEVVSKCLQLEELYLYLVNYKKDFSHDVSFPKLQRYAIININDYLKVWRIITMKKYAQSRGLFIDEFDVTAENFMSLPIKDLFIRAEFLHLRNLRGDFKNIIPSMDPQGMNHLITLQLVCCEKIECLIDNTMNTYNSVFSKLVYLRLERLCSLREFFCDPSSRCFLKNLGELLIKDCSKLSSISFSRKSKLCNLKVLSIYSCPVLTSLFVPSIAESLVLLEELKIINCNALRHIIDEVEEGNDVLSSTSSHSYLTLQKLRIIEIYGCNNLKYIFSENLAVGLMSLESVDIQRCLELKYVFNSEKKRNPAVYPSEKETNIINFSNLHVLRLLYLPNVIDIWPENCRPQLPSLKRIEYYECPKLLNSSISKMTAPNLPQNTTSKENEIAWFITNTFIQMDALLFPLQLELLWLSDVRVKGLFQIQMGEEGGSGELLPLNLDINYLELKNLPELNFLWKGPTGFLSLQKLAIVHIYECPKLKTIFSITVVTSLPMLRELGINNCDELEQIFDLGDAQQLQTLYSSQQLCFPKLKYITVKKCNKLKCLFYNLSASHFTSMKYLTIEKCSQLHKAFGFENEADGGGEEETAKKGEQVVLLKLTDITLKNLPNFEEIHHGFMLKENLNCHIREECPKYSPSLYLDP 1278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2536 1278 Coils Coil 41 61 - -
Pvu8g2536 1278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 399 IPR027417 -
Pvu8g2536 1278 SUPERFAMILY RNI-like 1037 1205 - -
Pvu8g2536 1278 SUPERFAMILY L domain-like 462 1004 - -
Pvu8g2536 1278 Pfam NB-ARC domain 153 368 IPR002182 GO:0043531
Pvu8g2536 1278 PANTHER - 1094 1225 - -
Pvu8g2536 1278 PANTHER - 15 1000 - -
Pvu8g2536 1278 Gene3D - 142 298 IPR027417 -
Pvu8g2536 1278 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1094 1225 - -
Pvu8g2536 1278 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 15 1000 - -
Pvu8g2536 1278 Gene3D Ribonuclease Inhibitor 1038 1212 IPR032675 -
Pvu8g2536 1278 Gene3D Ribonuclease Inhibitor 893 1025 IPR032675 -
Pvu8g2536 1278 Gene3D - 387 472 IPR036388 -
Pvu8g2536 1278 Gene3D - 300 386 IPR042197 -
Pvu8g2536 1278 Gene3D Ribonuclease Inhibitor 508 878 IPR032675 -
Pvu8g2536 1278 PRINTS Disease resistance protein signature 170 185 - -
Pvu8g2536 1278 PRINTS Disease resistance protein signature 242 256 - -
Pvu8g2536 1278 PRINTS Disease resistance protein signature 335 349 - -
Pvu8g2536 1278 PRINTS Disease resistance protein signature 615 631 - -
Pvu8g2536 1278 Coils Coil 69 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2536 Pvu-Chr8 55941610 55946157 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2536 156 486 WRKY Transcription Factor Family AT5G45050 25.806 1.35e-12 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2536 - - pvu:PHAVU_008G245200g 1781.15