Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2534 ATGGAGGACTTCTTTTTTTCTATCGCAACAAAGATTGCAGAATATGCAATAGTTATAATTTTAGACCATGCTAAATACTTGTGTTGTTTACACAACTTTGCTTTGAATCTTCCAAATGCCAAAAAACAACTGGAATTGACTCGAGAGAGTGTGAATGAGCAAATTAGAGAAGCCACTAATAGGATTGAAAAAGTTAATCCAGTTGTTGAGGAGTGGCAAAAAGATGTCAAGAAAGTCTTAGATGAAGTAAAACTGCTAGAGGAGAGAATATTGAATGTAAACAAGAGCTGTTTGAGAAGAAAAACAACTAAAATGATTCAGCTCCATCGTGATAGCAAGTTTGAACCGTTTTCTACAACTATTGAACTTCCAGGCATGAAGTACTATTCTTCCAATGATTTCATTATGTTCAAATCTACAGAAGTATCGTACAACAAGCTTCTAGAAACATTAAAGAATAAAAGTTTTTCCATGATTGGGTTAGTTGGATTAGGAGGTTCAGGGAAAACTACTTTAGCAAAAGAAGTGGGTAAAAAGGCTGAAGAGATGAAAATCTTTGAGAAGGTTGTTATGGTAACGGTGTCTCAATCACCAAATATCATAAGTATGCAAAATCAAATTGTTGACCAATTGAGTTTCCCATTAAATAAAGCATCAGATATAGGTACAACTCTTTTAATCTTGGACGATGTATGGGAAAAGCTAAACTTTGAAGCTTTAGGTATTCCATTTGATGAAACCTGCAAGACTTGTATAACAACTCGCAATAAAGAAGTATGCACTTCTATGCAATGTCAAAGTATAATTGAACTTAATCTCTTGAGTGACAATGAAGCATGGACTTTGTTCACACATTATGCAAGTATAACTGATGTCTCCTTTGAAGCTTTGAAAGATGTGACAAGAAAAATTATTAATGAATGTAAGGGATTGCCCATTGCAATTGTGACTGTAGCAAGCTCGCTAAAGGGGAAAACTATTGAAGGTTTTGAGTTAGCATTGTCAAGGCTAGAAAATTCTAAGCCACTAGATATTCCAAAAGTCTTAATAAGTCCTTATGTTTGTCTTGAATTAAGTTACAATAATTTGACAAACCAATTGGCTCAATCTTTATTGTTGTTGTGTTCTATGTTTCCAGAGGATTATGAAATACATTTAGAAGATTTATTTCGATTTGGAAGAGGATTTTGCAGAGTTGGGTCGTTTGGAAAAATGGAGAATGCAAGGAGAGAGATGCATGAAGCCATTGACATTCTTAAGAGTTGTTTTTTGTTAATGCAAGCCGGAACAAAAGAAAATGTAAAAATGCATGATTTGGTTCGTGATGTAGCCTTGTGGATTGCCGCTAAAAGTGGTCAAACAATTTTCACACGCACTGGAGTGGGTCTGGAAGTGTTGACAAATGATGAAATCATGAAAGATACGAAAGCATTAGCCTTATGGAATATAAAAGGATATGATTTTCTTAATTATAAAATAAATTGTCCAACACTTGAAATTCTCTTGCTTTGTTTTGGAGGTCACATAAAAGTACCAGATTTGTGTTCTGAAAGCTTGGAAGAACTTAAAACCTTAGCAAGCATAGATCTACCGTGGGGAGGATCTAGGCTTCTTTTGCCAGAGTCACTGAAGTCGTTAAAAAATCTTCGAACACTGTGCTTGAGAAATCATGATTTAGGTGACATATCTTTTGTGGAAAGACTGCAAACACTTGAGATTCTTGACTTGCATGGCTCTTCTTTTGAAGAATTTCCTGTTGGGATTGTAAAATTAAAGAAGTTGAAGCTTCTTGACTTGTTCGAATGTCGGCTTCAGAAAAATATAGTTGATGAAGTTTACGAAGTTGACTTTTCACATGATGTCTCTTTCTCCAATTTACAGAGGTATGCTATAATAAACTGTCATTCTTCTAGGTCTTGGGACCCAGCCCTGAAGAAATATGCACAGTCTAGAGGTTTATTAATACATGATTTTGATGTTACTGTTCAAAAATTTATATCATTACCAATCAAGAATCTCTTTATAAGAGCAGAGTTCCTTCATTTGAGGAACCTTGGGGGAGATTTTAAAAATATAATCCCATCCATGGATCCAAAAGGCATGAATCACTTGATTACCCTAAAACTCCGAGAGTGTGAAAAGATAGAATGTCTCATTGATAACACTATGAATACCAACAACAGTGTATTCTCTAAACTTGTTTACCTAAGTTTGGAATGGTTATGTAGCCTTCTAGAGGTTTTTTGTGATCCCTCATCGCGATGTTCCCTTGAAAATTTAGAAGAGCTCTTGATAAAATATTGTAGACAATTGAACAGCATCTCCTTTCCAAGGAAGTCTAAGCTATGCAATCTGAAGGTCCTTTTAATATCTTATTGTCCTATGCTAATTTCTCTCTTCGTGCCATCCATTGTCCAATCTCTAGTGTTGTTAGAGGAACTAAGAATATCTGGATGCAGCGCATTGAGGCACATAATAGAAGAAGTGGAAGAAGGGAACGATGTTCTTTCAAGCACCCCAAGTCATTCATATTTGACGCTCCAAAAATTAAAGATTTTTTGTATTGAAAATTGCAACAATTTGGAGTATATATTCTCTGAGAATTTAGCCGTAGGGCTATATGTATTTGGCAGTGAAAAGGAACGTAATCATGCAGTTTACCCAAGTGAAAAGGAGACTAATATCATAAATTTTTCTAATTTTCATACTCTATGGTTGATAGATTTACCAAATGTGATTGACATTTGGCCTCAATATTGTCGTCCACATCTTCCAAATCTTAAAAAGTTATACTGCCATAAATGTCCCAAATTGCTTGACTCTTCCATAAATAAGACGATGACTGCTTCAAATCTCCCGCAAGAAACAACTTCAAAGGAATCAGTATACTTTGTCAAAGTAAAAGGTCTCTTCCAATTCCAAATGGGAGAAGAAGGGGGCAGTAGAGAACTACTTCCTCTAAACTTAGATACATTAATCTTGGTAAACTTACCTGAGCTCAACTTCATATGGAAGGGCCCCACAGGTTTTCTAAGCCTCCAAAACCTTGAAACTGTTAGCATATATGGATGTCCAAAATTGAAAACCATCTTCTCCATCACTGTTGTTACAAGTTTACCAATGTTGAGGATTCTGGATATAAAGAACTGTGATGAATTGGAACAAATATTTGATTTAGGTGATGCACCACAACTACAAACCCTGTATTCTTCCCAACAACTCTGCTTCCCAAAACTCTATTCCATTAGAGTTAAAAAGTGCAATAAGTTGAAATGTCTTTTTTATAATCTATCGGCTAGTCATTTTCCCAGTCTGGGAACTTTGGAAATAGAAGAGTGCTATCAGTTACACAAGGCTTTTGGTTTTGAACATGAAGCTGATGATGGTGGTGAAGAACAGACGGCTAAAAAGGGAGAACAACTACTACTACAGAAACTGAACTTTATAACACTTACAAATTTGTCAAACTTCGAAGAGATTCACCACGGATTTAAGTTAAAAGAAGATGTTGTACATAACATAGAGGAATGTCCTAAGTATTCTCCAAGTTTATATCTGCATACA 3564 0.3533 MEDFFFSIATKIAEYAIVIILDHAKYLCCLHNFALNLPNAKKQLELTRESVNEQIREATNRIEKVNPVVEEWQKDVKKVLDEVKLLEERILNVNKSCLRRKTTKMIQLHRDSKFEPFSTTIELPGMKYYSSNDFIMFKSTEVSYNKLLETLKNKSFSMIGLVGLGGSGKTTLAKEVGKKAEEMKIFEKVVMVTVSQSPNIISMQNQIVDQLSFPLNKASDIGTTLLILDDVWEKLNFEALGIPFDETCKTCITTRNKEVCTSMQCQSIIELNLLSDNEAWTLFTHYASITDVSFEALKDVTRKIINECKGLPIAIVTVASSLKGKTIEGFELALSRLENSKPLDIPKVLISPYVCLELSYNNLTNQLAQSLLLLCSMFPEDYEIHLEDLFRFGRGFCRVGSFGKMENARREMHEAIDILKSCFLLMQAGTKENVKMHDLVRDVALWIAAKSGQTIFTRTGVGLEVLTNDEIMKDTKALALWNIKGYDFLNYKINCPTLEILLLCFGGHIKVPDLCSESLEELKTLASIDLPWGGSRLLLPESLKSLKNLRTLCLRNHDLGDISFVERLQTLEILDLHGSSFEEFPVGIVKLKKLKLLDLFECRLQKNIVDEVYEVDFSHDVSFSNLQRYAIINCHSSRSWDPALKKYAQSRGLLIHDFDVTVQKFISLPIKNLFIRAEFLHLRNLGGDFKNIIPSMDPKGMNHLITLKLRECEKIECLIDNTMNTNNSVFSKLVYLSLEWLCSLLEVFCDPSSRCSLENLEELLIKYCRQLNSISFPRKSKLCNLKVLLISYCPMLISLFVPSIVQSLVLLEELRISGCSALRHIIEEVEEGNDVLSSTPSHSYLTLQKLKIFCIENCNNLEYIFSENLAVGLYVFGSEKERNHAVYPSEKETNIINFSNFHTLWLIDLPNVIDIWPQYCRPHLPNLKKLYCHKCPKLLDSSINKTMTASNLPQETTSKESVYFVKVKGLFQFQMGEEGGSRELLPLNLDTLILVNLPELNFIWKGPTGFLSLQNLETVSIYGCPKLKTIFSITVVTSLPMLRILDIKNCDELEQIFDLGDAPQLQTLYSSQQLCFPKLYSIRVKKCNKLKCLFYNLSASHFPSLGTLEIEECYQLHKAFGFEHEADDGGEEQTAKKGEQLLLQKLNFITLTNLSNFEEIHHGFKLKEDVVHNIEECPKYSPSLYLHT 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2534 1188 Gene3D Ribonuclease Inhibitor 949 1126 IPR032675 -
Pvu8g2534 1188 Coils Coil 41 61 - -
Pvu8g2534 1188 Gene3D - 273 359 IPR042197 -
Pvu8g2534 1188 Gene3D - 130 271 IPR027417 -
Pvu8g2534 1188 Gene3D - 360 445 IPR036388 -
Pvu8g2534 1188 Gene3D Ribonuclease Inhibitor 618 871 IPR032675 -
Pvu8g2534 1188 CDD AAA 144 231 - -
Pvu8g2534 1188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 372 IPR027417 -
Pvu8g2534 1188 PANTHER - 25 938 - -
Pvu8g2534 1188 PANTHER - 1005 1117 - -
Pvu8g2534 1188 PANTHER - 847 1032 - -
Pvu8g2534 1188 SUPERFAMILY L domain-like 435 863 - -
Pvu8g2534 1188 SUPERFAMILY RNI-like 988 1117 - -
Pvu8g2534 1188 Pfam NB-ARC domain 143 341 IPR002182 GO:0043531
Pvu8g2534 1188 Coils Coil 69 96 - -
Pvu8g2534 1188 Gene3D Ribonuclease Inhibitor 492 617 IPR032675 -
Pvu8g2534 1188 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 847 1032 - -
Pvu8g2534 1188 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 25 938 - -
Pvu8g2534 1188 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1005 1117 - -
Pvu8g2534 1188 PRINTS Disease resistance protein signature 158 173 - -
Pvu8g2534 1188 PRINTS Disease resistance protein signature 218 232 - -
Pvu8g2534 1188 PRINTS Disease resistance protein signature 308 322 - -
Pvu8g2534 1188 PRINTS Disease resistance protein signature 589 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2534 Pvu-Chr8 55914578 55919238 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2534 144 459 WRKY Transcription Factor Family AT5G45050 25.217 3.63e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2534 - - pvu:PHAVU_008G245200g 1774.21