Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2533 ATGGCCTTGGCTACAAACAATTTTAGTGAGTCTGCTCAAATTGGAGAAGGGGGTTATGGGAAGGTTTATAAAGGTCGTCTTTGTGATGGCACTGTTGTTGCCATAAAACGTGCACAGGAGGGTTCACTGCAAGGTGAGAGGGAGTTCCTTACAGAAATAGAATTGCTATCAAGGCTACACCATCGCAACCTTGTGTCTCTAATTGGATACTGTGATGAAGAGGGTGAACAG 231 0.4459 MALATNNFSESAQIGEGGYGKVYKGRLCDGTVVAIKRAQEGSLQGEREFLTEIELLSRLHHRNLVSLIGYCDEEGEQ 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2533 77 SUPERFAMILY Protein kinase-like (PK-like) 3 75 IPR011009 -
Pvu8g2533 77 ProSitePatterns Protein kinases ATP-binding region signature. 14 36 IPR017441 GO:0005524
Pvu8g2533 77 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
Pvu8g2533 77 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN ISOFORM 1 1 77 - -
Pvu8g2533 77 PANTHER RECEPTOR-LIKE PROTEIN 55 1 77 - -
Pvu8g2533 77 Pfam Protein tyrosine and serine/threonine kinase 11 75 IPR001245 GO:0004672|GO:0006468
Pvu8g2533 77 ProSiteProfiles Protein kinase domain profile. 8 77 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2533 Pvu-Chr8 55902337 55902567 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2533 1 77 Receptor kinase-like Gene Family AT5G01950 76.623 1.61e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pvu8g2533 PK_Tyr_Ser-Thr 5e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2533 - K03231 pvu:PHAVU_008G2448000 156.762