Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2529 ATGGGATCCATGAGTAAAATGTGGGATTTCACATTGGACTTATTTCTTTCTATCGCAACAAAGATTGCAGAATATGCAAAATTTCCAATTTTAGATCATTTGCAATACTTATGTTGTTTCCACAACTTTGCTTCGAATCTTTCAAATGTCAAAGAACAACTAGAATTGACTCAAAAGAGTGTGAATGAGCGAATTAGAGAAGCCACTAATAGGACTGAAAAAGTTGAACCAACTGTTGAGAAGTGGCTAAAAGATGTTGAGAAAGTCTTAAATGAAGTACAACTACTGGAAGAAAGAATATTGAATAATAAAAGTGTTTCCATGATTGGATTAGTTGGATTAGGAGGCTCGGGGAAAACTACTTTGGCGAAAAAAGTGGGTAAAAAGGCTGAAGAGATGAAACTCTTTGAGAAGGTTGTTATGGCAACGATTTTTGACCAATTGAGTTTCAAGTTAAATGAAGCATCAGTTATAGGTAGAGCACAAAGACTATCAGAGAGATTAAGGAAAGGTACAACTCTTTTAATCTTGGATGATGTATGGGAAAAGCTAAACTTTGAAGCTTTAGGTATTCCATTTGATGAAAGCTGCAAGACTTGTTGCGTACTCCTAACAACTCGAAGTAGGGAAATATGCAATTTTATGCAATGCCAAAGTATAATTGAACTTGATCTCTTAATTGACGATGAAGCATGGATTTTGTTCAAAAAATATGCATATATAACTAATGTCTCCTCAGAAGCTTTGAAAGAAGGTGTGGCAAGAAAAATTATTAATGAATGTAAGGGATTGCCCATTGCAATTGTGACGGTCGCAAGCACGCTAAAGGGGAAAACTATTGAAGATTTTGAGTTATCATTGTCAAGGCTAGAAAATTCCAAGCCACTAGATGTTCCAAAAGGCTTAATAAAGGATTATGAAATAGATTTGGAAGATTTATTTCGATTTGGAAGAGGATTTTGCACAGTTGGGACGTTTGGAACAATGGAGAATGCAAGGAGAGAGATGCATGAAGCCATTGACATTCTTAAGAGTTGTTTATTGTTAATGCAAGCCGGAACAAAAGAAAATGTAAAAATGCATGATTTGGTTCGTGATGTAGGCTTGTGGATTGCCGCTAAAAGTGGTCAAGCAATTTTCACACGTAATGAAGTGGGTCTGGAAGTGTTAACAAATGACGAAATCATGAAAGATACGAAATCATTAGGCTTATGGAATATAAGAGCATATGACTCTCTTAATTATAAAATAAATTGTACAACACTTGAAATTCTCTTGCTTTGTTGTAGTGGTGGCATGAATGTACCATATGTGTGTTCTCAAAGCTTGGAAAAACTTAAAACCTTAATTATAAATGCATTAACAAAAAGCTATAGGTTTCTTTTGCCAGAGTCACCGAAGTCGTTAAAAAATCTTCGAACACTGTGCTTGAGAAATCATGATTTAGGTGACATATCTTTTGTGGAAAGACTACAAGCACTTGAGATTCTTGACTTGCATGGCTCTTCTTTTGAAGAATTTCCTGTTGGAATTGTAGAATTAAAGAAGTTGAAGCTTCTAGATTTGTTCGAATGTCGGCTTGAGAAAAATATAGGTGATGAAGTTTATGAAGTTGTAAGCAAATGTTTGCAGCTAGAGGAATTGAGTTTGTACTTGGTCAATTACAAAAAGGACTATTCACATGATGTCTCTTTCTCCAAATTACAGAGGTATGCTATAATAAACTATCATTCTTCTAGGTATTGGGATGTCCCAACCCTAAAGAAATATGCAGAGTCTAGGGGTTTATTAATACATGATTTTGATGTTATTGTTCAAAAAAATTTATCATTACCAATCAAGGATCTCTTTATAAGAGCAGAGTTCCTTTATTTGAGAAACCTTGGGGGAGATTTTAAAAATATAATCCCATCCATGGATCCACAAGGCATGAATCACTTGATTACCCTACAACTCGAATGGTGTGAAAAGATAGAGTGTCTCATTGATAACACTATGAATACCAGCAACAGCAACAGTGTATTCTCTAAACTTGTTTACTTAAGTTTGGAAAGGTTATGTAGCCTTCGACAAGTTTGGAAAGGTTATTTAGGAAAGCTCTTGATAGAAGATTGTAGTAAATTGAGCAGTATATCCTTTTCAAGGAAGTCTAAGCTATGCAATTTGAAGGTCCTTTCAATATCTCATTGCCCTGTGCTAACTTCTCTCTTCGTGCCATCCATTGTCCAATCTCTAGTGTTGAGGCACATAATAGATGATGTGGAAGAACGGAACGATGTGCTTTCAAGCACCCCAAGTCCTTCATATTTGACGCTCCAAAAATTAAAGATTATTGAAATTAAAGAATGCAACAATTTGGAGTACATATTCTCTGAGAATTTAGCCGTAGGGCTAGTGAGTTTGGAAAGTGTGGAAATTCGATATTGCTTTAAATTGAAGTATGTATTTGGAAGTGGAAAGGAACATTTACCAAATGTGATTGACGTTTGGCCTCAATATAGTCGTCCACAACTCTGCAATCTTAAAAGGATAGGGTGCTGTAAATGTCCCAAATTGCTTGACTCTTGCATAAGTAAGATGATGACTGCTTCAAATCTCCCGCAAGAAACAACTTCAAAGGAGAATGAAATAGCATGCTTCCTTACCAACATATTCAACCAATTGGGTTCTCTATTGTTTCCACTCCAACTTGAAAGGCTTTGGTTGTCTGATGTTAGATTAAAAGGAGGCAGTGGAGAACTGCTTCCTCTAAACTTGGATATAATTTCTCTATACTTGGTAAACTTACCTGAGCTCAACTTCATATGGAAGGGCCCCACAGTGAGCGGATGTCCAAAACTGAAAATCATCTTCTGCACCACTGTTGTTACAAGTTTACCAATGTTTAGCCGTCTGAATATAAATAACTGTGATGAATTGGAACAAATATTTGATTTAGGTGATGCACGACAACTCCAAACCCTGTATTCTTCCCAACAACTCTGCTTCCCAAAACTCGATTCCATTACAGTTAAAAACTGCAATAAGTTGAAATGTCTTTTATATAATCTATCGGCTACTCATTTTACTAGTCTGAATCAATTGGCAATAGAAGAGTGCTCTCAGTTACACAAGGTTTTTGGTTTTGAACATGAAGCTGATGATGGTGGTGAAGAAGAGACGGCTAAAAAGGGAGAACAACTACTACTACAGAAACTGAACTTTATAACACTCAAAAATTTGCCAAACTTTGAAGAGATTCACCACGGATTTAAGTTAAAAGAAAATGTTTACCGTCATATCGTGGAGGAATGTCCTAAGTATTCTCCA 3309 0.3587 MGSMSKMWDFTLDLFLSIATKIAEYAKFPILDHLQYLCCFHNFASNLSNVKEQLELTQKSVNERIREATNRTEKVEPTVEKWLKDVEKVLNEVQLLEERILNNKSVSMIGLVGLGGSGKTTLAKKVGKKAEEMKLFEKVVMATIFDQLSFKLNEASVIGRAQRLSERLRKGTTLLILDDVWEKLNFEALGIPFDESCKTCCVLLTTRSREICNFMQCQSIIELDLLIDDEAWILFKKYAYITNVSSEALKEGVARKIINECKGLPIAIVTVASTLKGKTIEDFELSLSRLENSKPLDVPKGLIKDYEIDLEDLFRFGRGFCTVGTFGTMENARREMHEAIDILKSCLLLMQAGTKENVKMHDLVRDVGLWIAAKSGQAIFTRNEVGLEVLTNDEIMKDTKSLGLWNIRAYDSLNYKINCTTLEILLLCCSGGMNVPYVCSQSLEKLKTLIINALTKSYRFLLPESPKSLKNLRTLCLRNHDLGDISFVERLQALEILDLHGSSFEEFPVGIVELKKLKLLDLFECRLEKNIGDEVYEVVSKCLQLEELSLYLVNYKKDYSHDVSFSKLQRYAIINYHSSRYWDVPTLKKYAESRGLLIHDFDVIVQKNLSLPIKDLFIRAEFLYLRNLGGDFKNIIPSMDPQGMNHLITLQLEWCEKIECLIDNTMNTSNSNSVFSKLVYLSLERLCSLRQVWKGYLGKLLIEDCSKLSSISFSRKSKLCNLKVLSISHCPVLTSLFVPSIVQSLVLRHIIDDVEERNDVLSSTPSPSYLTLQKLKIIEIKECNNLEYIFSENLAVGLVSLESVEIRYCFKLKYVFGSGKEHLPNVIDVWPQYSRPQLCNLKRIGCCKCPKLLDSCISKMMTASNLPQETTSKENEIACFLTNIFNQLGSLLFPLQLERLWLSDVRLKGGSGELLPLNLDIISLYLVNLPELNFIWKGPTVSGCPKLKIIFCTTVVTSLPMFSRLNINNCDELEQIFDLGDARQLQTLYSSQQLCFPKLDSITVKNCNKLKCLLYNLSATHFTSLNQLAIEECSQLHKVFGFEHEADDGGEEETAKKGEQLLLQKLNFITLKNLPNFEEIHHGFKLKENVYRHIVEECPKYSP 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2529 1103 Gene3D - 47 223 IPR027417 -
Pvu8g2529 1103 Gene3D - 226 309 IPR042197 -
Pvu8g2529 1103 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 34 952 - -
Pvu8g2529 1103 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 940 1083 - -
Pvu8g2529 1103 PANTHER - 34 952 - -
Pvu8g2529 1103 PANTHER - 940 1083 - -
Pvu8g2529 1103 CDD AAA 91 206 - -
Pvu8g2529 1103 Pfam NB-ARC domain 94 293 IPR002182 GO:0043531
Pvu8g2529 1103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 297 IPR027417 -
Pvu8g2529 1103 SUPERFAMILY RNI-like 643 852 - -
Pvu8g2529 1103 Coils Coil 79 99 - -
Pvu8g2529 1103 Coils Coil 51 71 - -
Pvu8g2529 1103 SUPERFAMILY L domain-like 395 586 - -
Pvu8g2529 1103 Gene3D Ribonuclease Inhibitor 617 860 IPR032675 -
Pvu8g2529 1103 Gene3D Ribonuclease Inhibitor 389 586 IPR032675 -
Pvu8g2529 1103 PRINTS Disease resistance protein signature 108 123 - -
Pvu8g2529 1103 PRINTS Disease resistance protein signature 167 181 - -
Pvu8g2529 1103 PRINTS Disease resistance protein signature 261 275 - -
Pvu8g2529 1103 PRINTS Disease resistance protein signature 770 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2529 Pvu-Chr8 55866539 55872135 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2529 94 385 WRKY Transcription Factor Family AT5G45050 26.006 4.09e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2529 - - pvu:PHAVU_008G244500g 2167.12