LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu8g2528	ATGTATCTTTCAAAGGGTTGTAAGTGTGAAGAAGCTGTTCTGTTGTGCTTGTGTTTCTTCTGCTATTTTCTATTTGCTACTGCTTTGATCACTGATCCCACTGAAGTTGACGCATTAAGAACCATAAAGGGAAGTTTGATTGATACTAATGGAAATTTGAGCAACTGGGATCGTGGAGATCCTTGTACATCTAACTGGACAGGAGTCATGTGCTTGGATACAACGTTAGTCGATGGCTATCTACATGTTAGAGAACTGCATTTACTGAACATGAACTTGTCTGGAACTTTGGCACCAGAGATTGGCCGCTTATCTTATCTGGAAGTGTTGGACTTTATGTGGAATGACATAACTGGGAGCATACCGAAGGAAATTGGCTTTATCAATCCTTTGAAACTCTTACTCCTGAATGGAAATCAGTTAACAGGTGAATTACCAGAAGAGCTTGGCTTTCTTCCATTCCTGATTCGATTCCAAATAGATCAGAACAATATCACAGGACCTATACCTTTATCATTTGCAAAACTGAACACCACTGTACATTTTCACATGAACAATAATTCACTTAGTGGGAAAATACCACCACAACTTTCCAGCTTAGGAAGCCTTCTTCACCTTCTTCTTGACAACAACAAATTGACAGGAGAACTTCCCTCTGAGCTCTCTGAGATGCCAAGCTTAAAGATTCTTCAACTTGATAACAACAACTTTGGTGGAAATAGCATTCCACATTCTTATGCAAACATGTCAAAATTGATAAAACTGAGTCTTAGGAACTGCAACTTGCAAGGACCAATTCCTGATTTGAGCACGATACCACGCCTAACTTATCTTGACCTCAGTTTCAATCAGTTCAATGAATCAATTCCAACTAATAAGCTTTCAGACAATATCACAACCATTGATTTGTCAAACAATGATCTTATTGGAACTATTCCATCTTACTTTTCTCGTCTTCCACGTCTTCAAAAGCTGTCAATTGCAAACAATTCATTGAACGGAAGTGTTCCTTCAACCATTTGGCAAGACAGGATTTTAAATGGATCAGAAATGCTTCACTTGGACATGCAAAGGAATCAATTTACAAGCATATCAGGCAGTACAAATCTTCCTCCAAATGTCACTCTCTGGCTAGAGGGAAATCCTATGTGCTCAAATAATAACACCTTAGCTCAGTTCTGTGGATCTGAAAGTGACAGTAGCATCAATGGAAACTTCAGTGTTAGCTGTCCCACCCAAGCATGCCCCCCTCCCTATGAATATACAGTGGACTGTTTCTGTGCTGCCCCGTTGGTTGTTAATTATCGATTAAAAAGTCCAGGATTTTCAGATTTCCGCACGTACATGAATGCATTTCAGAGCATGATGTCAAGGGGTCTTAAAATACATATTATTCAGTTCCATATTAACAAATTTGAATGGGAAGAAGGTCCTCGGTTGGGAATGAACTTGAAGCTTTTTCCTATGTATGTTGATGATAACAGCTCTCATGTTTTCAATACAAGTGAGGTTCTTCGCCTCAGGAACTTGTTCTTAGACTTTGATCTTCCAACTAATGACTTGTTCGGACCTTTTGAGCTTCTAGACTTCATTCTCCTGGATCCTTACAGAGATGTGACTGTTACCTCTCCGAGTTCAGGGATCAGCAAAGGAGCACTGGCTGGAATAGTCTTAGGTGCAATTGCCTTTGTGGTTACTTTTTCTGCAACCATTCTCGTATTGAGATTACGTTTGAGAGATACACCTTCCAAACGGACAAAAGCATCTAGGGTCTCAATAAAAATTGAAGGTATAAGATCATTTTATTACGAAGAAATGCAAGCCGCTACAAACAATTTTAGTGTCTCTGCTCGAATTGGACAAGGGGGGTATGGGAGGGTTTTTAAAGGTGTTCTTCCTGATGGCACTGTTGTTGCCATAAAACGTGCACAGGAGGGTTCCCTGCAAGGTGAGAAGGAGTTTCTTACAGAAATAGAGTTGCTATCAAGGCTACATCACCGCAACCTTGTGTCTCTGATTGGATACTGTGATGAAGAGGGTGAACAGATTTTGGTTTATGAATACATGCCAAATGGAACCCTAAAGGATCACCTTTCTGTTTATTCAGAAAAACCTCTTACTTTTTCCATGAGGTTGAAGATTGCTCTAGGGTCAGCTAAAGGTCTTGTGTATCTACACACGGAAGTAGATCCTCCAATATTCCACCGAGATGTCAAGGCCACCAATATATTATTGGACTCCAAGTTCACTGCAAAAGTTGCTGACTTTGGACTTTCACGACTTGCCCCAGTCCCAGATACACAAGGAAACGTGCCTGGTCATGTATCTACTGTGGTAATGGGAACCCCGGGTTATATTGATCCAGAGTACTTCTTAACTCACAAATTGACTGACAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTAGAACTTGTGACTGGGAGGCCACCAATCTTTCATGGCGAAAATATTATCAGACATGTTAGTATGGCATACGAATCTGGTGGATTGTTTTCAGTTATTGATAAACGTATTGGCTCTTATCCTTCAGAATATGTGGAGAAGTTTTTGACGTTGGCCTTAAAGTGTTGCAAAGATGCACCAGATGAGCGACCTAAAATAGCAGAAGTGGCTAGAGAGCTTGAAAACATCTGTTCAATGTTACCCGAGACCAACACCGTGGAAGCAGAACATGGGACAAGTGGTTCTGGAAGAATATTCAGTTCACAACCTTCATCATCTGCTACCAGGACTCCTTTTGTTTCAGAAGATGTGTCTGGTAGTGACCTTGTCAGTGGAAAGATGCCTACCATTAGGCCTAGATAA	2829	0.4054	MYLSKGCKCEEAVLLCLCFFCYFLFATALITDPTEVDALRTIKGSLIDTNGNLSNWDRGDPCTSNWTGVMCLDTTLVDGYLHVRELHLLNMNLSGTLAPEIGRLSYLEVLDFMWNDITGSIPKEIGFINPLKLLLLNGNQLTGELPEELGFLPFLIRFQIDQNNITGPIPLSFAKLNTTVHFHMNNNSLSGKIPPQLSSLGSLLHLLLDNNKLTGELPSELSEMPSLKILQLDNNNFGGNSIPHSYANMSKLIKLSLRNCNLQGPIPDLSTIPRLTYLDLSFNQFNESIPTNKLSDNITTIDLSNNDLIGTIPSYFSRLPRLQKLSIANNSLNGSVPSTIWQDRILNGSEMLHLDMQRNQFTSISGSTNLPPNVTLWLEGNPMCSNNNTLAQFCGSESDSSINGNFSVSCPTQACPPPYEYTVDCFCAAPLVVNYRLKSPGFSDFRTYMNAFQSMMSRGLKIHIIQFHINKFEWEEGPRLGMNLKLFPMYVDDNSSHVFNTSEVLRLRNLFLDFDLPTNDLFGPFELLDFILLDPYRDVTVTSPSSGISKGALAGIVLGAIAFVVTFSATILVLRLRLRDTPSKRTKASRVSIKIEGIRSFYYEEMQAATNNFSVSARIGQGGYGRVFKGVLPDGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLIGYCDEEGEQILVYEYMPNGTLKDHLSVYSEKPLTFSMRLKIALGSAKGLVYLHTEVDPPIFHRDVKATNILLDSKFTAKVADFGLSRLAPVPDTQGNVPGHVSTVVMGTPGYIDPEYFLTHKLTDKSDVYSLGVVFLELVTGRPPIFHGENIIRHVSMAYESGGLFSVIDKRIGSYPSEYVEKFLTLALKCCKDAPDERPKIAEVARELENICSMLPETNTVEAEHGTSGSGRIFSSQPSSSATRTPFVSEDVSGSDLVSGKMPTIRPR*	943

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu8g2528	942	Gene3D	Transferase(Phosphotransferase) domain 1	689	901	-	-
	Pvu8g2528	942	PANTHER	LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN	14	914	-	-
	Pvu8g2528	942	Pfam	Leucine rich repeat N-terminal domain	33	71	IPR013210	-
	Pvu8g2528	942	Pfam	Protein kinase domain	614	879	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu8g2528	942	MobiDBLite	consensus disorder prediction	896	926	-	-
	Pvu8g2528	942	SUPERFAMILY	L domain-like	44	405	-	-
	Pvu8g2528	942	Gene3D	Ribonuclease Inhibitor	153	223	IPR032675	-
	Pvu8g2528	942	Gene3D	Ribonuclease Inhibitor	295	387	IPR032675	-
	Pvu8g2528	942	Gene3D	Ribonuclease Inhibitor	34	152	IPR032675	-
	Pvu8g2528	942	ProSiteProfiles	Protein kinase domain profile.	613	885	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu8g2528	942	Gene3D	Phosphorylase Kinase; domain 1	583	688	-	-
	Pvu8g2528	942	MobiDBLite	consensus disorder prediction	896	942	-	-
	Pvu8g2528	942	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	14	914	-	-
	Pvu8g2528	942	ProSitePatterns	Protein kinases ATP-binding region signature.	619	641	IPR017441	GO:0005524
	Pvu8g2528	942	SMART	serkin_6	613	885	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu8g2528	942	Gene3D	Ribonuclease Inhibitor	224	294	IPR032675	-
	Pvu8g2528	942	CDD	STKc_IRAK	619	885	-	-
	Pvu8g2528	942	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	733	745	IPR008271	GO:0004672\|GO:0006468
	Pvu8g2528	942	SUPERFAMILY	Protein kinase-like (PK-like)	598	896	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu8g2528	Pvu-Chr8	55846435	55858369	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu8g2528	11	894	Receptor kinase-like Gene Family	AT5G01950	54.606	0.0	939

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Pvu8g2528		Pkinase	1.2e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu8g2528	-		-	var:108337551	1611.66