Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2522 ATGCTTGCTGCTGCTGCTTCAGCTTCTCGAAACCTTATTCAACGCGATGCCAGCGTCGGTGCTTGCAGTGGCAGTGGCAATCGAGTTCGCTCTCTTTTTACAGTTTCTGTGATCGGCACAGTCTACCCAATTCGCACTAAAACATGTTACAGTCATGGTTATGGAATCGGTTTCAATGTCCCAAAACAGAGAGCGTGCCCAGGTTTGCTTTTTGCTGTAAAGGGGTTCCTCTCGGATTCATCAAATTCTAATTCTCCACATGGCAGAGTTCCCAGACCTTACCTACCACACCCTATTTCAAGTGTGGATGGGCGAGCATTGTTCTCAACTTCAACTAAAGATGATGGAAACCAAAGCCAAAAACCTACTTCTTCGACCATTGCTAAACCCCCACCATCACTTCCTGATGGGCAAGTTGCTGATGTGAAGATCATACGCACACTTGCCAGTTACCTTTGGATGAAGGATAATCTTGAATTTCGGGTTCGGATTATTGCTGCATTGGGCTTACTTGTCGGGGCTAAGGTTTTGAATGTTCAGGTCCCGTTCTTGTTCAAGCTTGCAGTTGATTCGTTGACGACTGCCTCGGGGAATGCTGCTGCTCTTGCTTCGAGTTCAAGTGGGATTGCTCTTTTTGCAACCCCAGTGGCGGTGTTGGTTGGATATGGGATTGCGCGTTCTGGAGCTGCTGCTTTCAATGAACTGCGGACTGCTATATTTTCTAAGGTTGCACTGCGAACTATTCGATTAGTATCAAGGAAGGTCTTCTCTCATTTGCATGACCTTGACCTTCGGTATCATCTAAGCCGAGAAACTGGTGCATTAAGTAGAACAATTGATCGTGGTAGTCGTGGAATAAGTTTCATTCTCTCCTCTATGGTGTTCAATGTAGTACCTACCATGTTAGAGATATCTATGGTAGCAGGTATACTGGCCTACAAATTTGGAGCTCCCTTTGCGCTGATTACTTCCTTATCGGTTGCTGCTTATGTTATTTTCACACTGTCTATCACACAGTGGAGGACTAAGTTCAGGAAAGCCATGAATAGGGCTGATAATGATGCTAGTACAAGGGTTATTGATTCACTTATTAATTATGAGACTGTCAAATATTTTAATAATGAAGTTTATGAAGCTGATAATTATGACAAGTACCTGAAGAGATATGAAGATGCTGCTCTGAAAACCCAACGAAGTCTTGCTTTGTTGAACTTAGGTCAAAATATTATATTTAGTACTGCTCTTTCATCCGCAATGGTGCTGTGCTCTCATGGGATCACGGATGGAACGATGACTATTGGTGATTTGGTAATGGTGAATGGACTTCTCTTCCAACTATCTCTTCCACTTAATTTCCTTGGTAGTGTTTATCGTGAGACTATACAGAGTTTAGTTGACATGAAATCCATGTTTCAGTTACTTGAGGAAAGAGCAGAAATCAGGGATAAAGAAAATGCACAGCCTCTTAGATTTAATGGGGGGAGTATCCAATTTGAGAATGTACATTTTAGTTACCTCACAGAAAGAAAGATACTAGATGGAATATCGTTTGTTTTGCCAGCTGGTAAAAGTGTTGCAATTGTTGGGACTAGTGGAAGTGGAAAATCAACCATTCTTAGATTGCTATTCAGGTTCTTTGATCCTAATTCTGGAAGTATAAAGATAGATAATCAAGATATTCGGGACATAACCCTTGAGAGTTTGCGGAAGTCCATTGGTGTTGTTCCACAAGATATTGTACTTTTTAATGATACTATATTTCACAACATTCACTACGGTCGGCTTTCTGCAACAAAGGAGGAGGTCTATGAAGCTGCTCAGCAAGCAGCAATTCATAACACTATCATGAATTTTCCCGATAAATATTCAACTGTTGTCGGAGAGCGAGGGCTAAAGTTAAGTGGTGGTGAGAAGCAACGTATTGCCTTGGCTCGTTCATTCTTAAAAGCACCTGCAATTCTGTTGTGTGATGAAGCTACAAGTGCTCTTGACAGCACAACAGAAGCAGATATTTTAAGTGCGTTGAAGTCAGTAGCAAAAAATCGGACTTCCATATTCATTGCTCACAGGCTTACCACTGCAATGCAGTGTGATGAGATTATTGTCCTGGAAAATGGGAAGGTGATTGAGCAAGGATCCCATGAAGTACTCTTATCAAAAGCAGGAAGATATGCACAACTGTGGGGACAACAAAATAACTCAATTGATGCACTTGATACAGCCATCAATGTGGGAGCATAA 2241 0.4186 MLAAAASASRNLIQRDASVGACSGSGNRVRSLFTVSVIGTVYPIRTKTCYSHGYGIGFNVPKQRACPGLLFAVKGFLSDSSNSNSPHGRVPRPYLPHPISSVDGRALFSTSTKDDGNQSQKPTSSTIAKPPPSLPDGQVADVKIIRTLASYLWMKDNLEFRVRIIAALGLLVGAKVLNVQVPFLFKLAVDSLTTASGNAAALASSSSGIALFATPVAVLVGYGIARSGAAAFNELRTAIFSKVALRTIRLVSRKVFSHLHDLDLRYHLSRETGALSRTIDRGSRGISFILSSMVFNVVPTMLEISMVAGILAYKFGAPFALITSLSVAAYVIFTLSITQWRTKFRKAMNRADNDASTRVIDSLINYETVKYFNNEVYEADNYDKYLKRYEDAALKTQRSLALLNLGQNIIFSTALSSAMVLCSHGITDGTMTIGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKSMFQLLEERAEIRDKENAQPLRFNGGSIQFENVHFSYLTERKILDGISFVLPAGKSVAIVGTSGSGKSTILRLLFRFFDPNSGSIKIDNQDIRDITLESLRKSIGVVPQDIVLFNDTIFHNIHYGRLSATKEEVYEAAQQAAIHNTIMNFPDKYSTVVGERGLKLSGGEKQRIALARSFLKAPAILLCDEATSALDSTTEADILSALKSVAKNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHEVLLSKAGRYAQLWGQQNNSIDALDTAINVGA* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2522 746 Gene3D - 488 742 IPR027417 -
Pvu8g2522 746 ProSitePatterns ABC transporters family signature. 633 647 IPR017871 GO:0005524
Pvu8g2522 746 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 165 462 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu8g2522 746 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 496 730 IPR003439 GO:0005524
Pvu8g2522 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 731 IPR027417 -
Pvu8g2522 746 CDD ABCC_ATM1_transporter 496 731 - -
Pvu8g2522 746 Pfam ABC transporter transmembrane region 165 449 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu8g2522 746 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 136 737 IPR039421 -
Pvu8g2522 746 SMART AAA_5 521 707 IPR003593 -
Pvu8g2522 746 CDD ABC_6TM_ATM1_ABCB7 167 470 - -
Pvu8g2522 746 MobiDBLite consensus disorder prediction 110 131 - -
Pvu8g2522 746 Pfam ABC transporter 512 661 IPR003439 GO:0005524
Pvu8g2522 746 PANTHER ABC TRANSPORTER OF THE MITOCHONDRION 1-RELATED 136 737 - -
Pvu8g2522 746 Gene3D ABC transporter type 1, transmembrane domain 151 486 IPR036640 GO:0005524|GO:0016021
Pvu8g2522 746 MobiDBLite consensus disorder prediction 110 134 - -
Pvu8g2522 746 SUPERFAMILY ABC transporter transmembrane region 150 476 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2522 Pvu-Chr8 55767591 55790702 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2522 332 732 Calmodulin-binding Proteins AT2G36910 37.046 2.15e-65 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2522 K05662 - gmx:100779975 1273.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2522 8 55767591 55790702 Pvu8g2522 8 55767591 55790702 ECH