Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2496 ATGGCACCTGTTTTGCCTCCAGGTTTTAGGTTCCACCCTACTGATGAAGAACTTGTTGCTTATTACCTTAAAAGGAAGATCAATGGCCGAAAGATTGAGTTGGAAATCATTCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTACCGGGGAAATCATTGTTACCGGGAAAGGATTTGGAGTGGTATTTCTTTAGTCCTCGTGATAGAAAATACCCAAATGGATCAAGAACAAACCGTGCAACAAAATCTGGGTATTGGAAGGCCACAGGGAAGGATAGAAAAGTGAATTCGAAGGCTCGATCTGTGGGTATGAAGAAAACCCTAGTTTATTATCGAGGAAGAGCACCCCATGGCTCTCGCACAAACTGGGTTATGCATGAATATCGTCTCGATGAGAGAGAGTGCGAAACTGCTTCAGGCTTGCAGGATGCATATGCCCTTTGCCGTGTGTTGAAGAAGACTGCAGTGATTCCTCAAAAAGTTGAGGGGCATTATGTTGAAGTTCCCAATGTGAATCAGATTACAAGCGATCAATCATCAAGCATTGAACTATACTCTGAAGGAAGGGGCGAAGATTTAGATAGCTCTAATTATTTTATGTCTGTGAATACTTGTTCACCCCACAATCTTGGAATTGAGACTCCTCTCAATATCAGTGGTGGAACCACCAGGGATCATGAGAAATGGTCACACGTCTCATTACAAGATCCAATGTTTAGTCTTCCAACTTCATATCCTCATTTTGGAGCGTACCTTCCATCCAAGGTGGATATAGCTCTAGAGTGTGCAAGAATGCAACATAGGTTTGTTATGCCACCTTTGGAGGTGGATGACTTCCCTCAAGTTGGAATCTCAGAGCTGAAAATGACACAAGCCTCTAGTTCCATGCAAGGAAGCAGACCTGAAACGGATATCTTGCAGGAAATTCTTTCAGTGGCTCATGCCTCTCAGGAATTAATAAACCAATCCAGCTATTCGCAGGAATGGGGTGGCAATGATTATTATTATGCTCCTCGTGATGACGATTTTACCTTCATGGTTGGCACTAACTACAATCATTCAAATGAAATGAGCTCAGCGAGGTATGTTGACAAAGCATGGGAAGATGCAAACACAAGGACCATAGAGATCGGAGATATGGATCAAGAATTTAAGGCAGAGAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCAAGAGAAGATTTAGAAAAGATGGAAGAACAAAATATTGTCCCAATAGAGGATATTTCAAGCCTCCAAACTAACATGAAAGAAAATGAGGTGCAAGAATATGAGCAGCACAACATGGAACACAATGACACTGAAATCAATGATTTCTCATTGGGTTTCATCAATGATAGCGACCCTACCGAGAACTTCACAGAAGATGGTAACAGTGATGATTATTCAGGTTCTCCAAGTTTTGAGGTGGTTGAGGAAATAAAGGTCAATCGTGGAATGTTTGTTTCGACTGGTCAAGTGGCCGAGACATTCTTTCACCAAATGGTTCCATCACAAACCGTCCAAGTTCAGCTTAATACAGTGATGGCACACGATCATTATGTAGAGAATGCAGAAGCAATGCTGTTGATAATGGAGGACCAGGGGTCTTTAAGGAAGGTTAAGGCCTATGTGATGGGGAAGCTACTGAAGCCATCAATGACAATAGCAAGTGCAGTTGTGTTCGTCTTTGCACTTGTGTTGATGCATTATGCTTTTATAAAGGGAGAAGTGAAAATTTGGAATGAGACATGTTGCAGTAACAGTGGTAGCATCATGAAGAAAACGAGTCAATCATCTCAGATAATGAAATGGAATGAGCCAAATGAGGTTTGGTTTGTTGGTATCAAAAGTGAGAAAGGATTAAGTGCAGTCTTGAAGAAAATAGGCATTTTTCTCACTATATCGTTTGCTCTTTGTACCATGTGGGCTAACCACAATTGA 1953 0.4147 MAPVLPPGFRFHPTDEELVAYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSKARSVGMKKTLVYYRGRAPHGSRTNWVMHEYRLDERECETASGLQDAYALCRVLKKTAVIPQKVEGHYVEVPNVNQITSDQSSSIELYSEGRGEDLDSSNYFMSVNTCSPHNLGIETPLNISGGTTRDHEKWSHVSLQDPMFSLPTSYPHFGAYLPSKVDIALECARMQHRFVMPPLEVDDFPQVGISELKMTQASSSMQGSRPETDILQEILSVAHASQELINQSSYSQEWGGNDYYYAPRDDDFTFMVGTNYNHSNEMSSARYVDKAWEDANTRTIEIGDMDQEFKAERMVENLRWVGMSREDLEKMEEQNIVPIEDISSLQTNMKENEVQEYEQHNMEHNDTEINDFSLGFINDSDPTENFTEDGNSDDYSGSPSFEVVEEIKVNRGMFVSTGQVAETFFHQMVPSQTVQVQLNTVMAHDHYVENAEAMLLIMEDQGSLRKVKAYVMGKLLKPSMTIASAVVFVFALVLMHYAFIKGEVKIWNETCCSNSGSIMKKTSQSSQIMKWNEPNEVWFVGIKSEKGLSAVLKKIGIFLTISFALCTMWANHN* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2496 650 Pfam No apical meristem (NAM) protein 6 132 IPR003441 GO:0003677|GO:0006355
Pvu8g2496 650 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Pvu8g2496 650 Gene3D NAC domain 14 158 IPR036093 GO:0003677|GO:0006355
Pvu8g2496 650 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 389 - -
Pvu8g2496 650 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 389 - -
Pvu8g2496 650 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2496 Pvu-Chr8 55551586 55555293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2496 1 645 NAC Transcription Factor Family AT1G65910 42.921 2.31e-155 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu8g2496 NAM 4.3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2496 - - vra:106763980 1159.44