Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2482 ATGACGCCTAAAACTTTCAATTTTCCCGCCAAACGCACAACCGCACTTTTCCTTCTAACCGCAACCGCCGCCGTCGCCGCCGCACAAACTACCAACTCCCCTGTGCTCTCTCCTCTTCCGGCACTCTCGGCGGGCAAAACTGGAGGTGAAATCCACGGCCTCGTCCGCACCACTCGTGCCGTCTCCACGGTTGCTTCCACTGTTGTTGACTACGAATTCTCTTTGCGCGGCCTTAAAAAAGACTCCGACCAGTACCGCCTAACGATTTCTCAGGTGCATCTACGCTCTGCCAAAAGGTTTCTCAAGTTATGCGAAGCCAACAAAGGGTTTTATGTGAAGGCTGGACAGTTCGTTGCAGCGCAGAAAGTGCTTCCTGCAGAGTATTCGTCCACTTTATCTTCGTTACAAGACCGGGTTGCTCCCATTCCTTTTAAAATTGTCAGGGAAGTGTTAAAGAATAGTCTCGGACCTGATTTCTCTGACATGTTTCTGTCAATTGATGAACAACCTATAGCTGCTGCATCTATTGCTCAAGTTCACCGTGGAGTGCTGAAAAGTGGTTATGAAGTAGCAATCAAGGTACAATATCCTTGGATAGAGCAGCAGATGAATTTCGATACAAGAACAATGTATTTCCTATCGAAAACTATTGCATGGTTATACCCTCAATACAAGCTCGACTGGCTACCATTAGCGTTTGCCAAGTCTGTGTCCTCAGAGCTTGATTTTGTTCAGGAGGCAAGGAATTCTGAGATAGCAGCCAAAACTTTGAGAAATAACAAAATGGTCAGAATTCCTCATGTATTCTGGGACTTGACAACGAAGCTTGTCCTAACCATGCAGTTTTATGCAGGACACAAGATTGATGACTTGGATTTTTTGAATCAGATTGGGGTTGATTCAGAAAAGGTAGCAAAATCACTGATTCAGCTATTTGCTGAAATGATATTTGTACATGGTTACATACATGGTGATCCTCACCCTGGTAATATATTAGTTTCCCCAGAAGGCTGTAATGGTTTTTCTTTGGTTCTTCTAGATCATGCAGTGTACACGGTATTGGATGAAGAATTTAGAAAGGATTTCTGTCAGTTATGGGAAGCCTTGATTCTCAAGGATTCAATGAAAACGTTGTGGTTTGGTGAGCGATTAGGTGCTGGGAAGTATTCCAGATACTTACCCATCATTTTTACTGGAACAACCATTGACAGCAAATATGCTGTTGGAATATCAATTGAAGAAAAGGAGGCCTTGAAACGCGAACTGAAATCTCTGTTGTTTGAGGACTTACATTCATTCATGGAGTCTCTGCCGCCAGATTTTATTGGTATAATGCGTGCAGATGCACTGATAAGGTCTATTATTAGAAAGATGGATGTCTCACGGGCCATGAGGTTGCTAACTTACACCAAATATGCTGTGTATGGTGGTCTGTGTCCAAAGTTGAATGGTGAAGGACAATCACGTAAAATACTCGGAACAAACTTCTATTTTGCTGTGAAAGCTGGTTTTTTCAGTTTCATATCAACTTTAAAATATGTTCGGATCCTAATAACGGTACTTATAGGGGCTCTTAACGTTATCCCTTGGCAGCAGAAGTTGAAAAGTGTACAGAGTTACTTGTATAGCAAGATCAATTGCGACTCTTTGGGCTTCTTGGTGCATTCTGTTTTTCTTCTTTTATGCATCCGTCCTACTGCATTGTTTTAA 1710 0.4263 MTPKTFNFPAKRTTALFLLTATAAVAAAQTTNSPVLSPLPALSAGKTGGEIHGLVRTTRAVSTVASTVVDYEFSLRGLKKDSDQYRLTISQVHLRSAKRFLKLCEANKGFYVKAGQFVAAQKVLPAEYSSTLSSLQDRVAPIPFKIVREVLKNSLGPDFSDMFLSIDEQPIAAASIAQVHRGVLKSGYEVAIKVQYPWIEQQMNFDTRTMYFLSKTIAWLYPQYKLDWLPLAFAKSVSSELDFVQEARNSEIAAKTLRNNKMVRIPHVFWDLTTKLVLTMQFYAGHKIDDLDFLNQIGVDSEKVAKSLIQLFAEMIFVHGYIHGDPHPGNILVSPEGCNGFSLVLLDHAVYTVLDEEFRKDFCQLWEALILKDSMKTLWFGERLGAGKYSRYLPIIFTGTTIDSKYAVGISIEEKEALKRELKSLLFEDLHSFMESLPPDFIGIMRADALIRSIIRKMDVSRAMRLLTYTKYAVYGGLCPKLNGEGQSRKILGTNFYFAVKAGFFSFISTLKYVRILITVLIGALNVIPWQQKLKSVQSYLYSKINCDSLGFLVHSVFLLLCIRPTALF* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2482 569 Pfam ABC1 atypical kinase-like domain 134 376 IPR004147 -
Pvu8g2482 569 PANTHER ABC1 FAMILY PROTEIN 32 492 - -
Pvu8g2482 569 SUPERFAMILY Protein kinase-like (PK-like) 136 372 IPR011009 -
Pvu8g2482 569 CDD ADCK1-like 134 385 IPR045307 -
Pvu8g2482 569 PANTHER AARF DOMAIN CONTAINING KINASE 1 (PREDICTED) 32 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2482 Pvu-Chr8 55405564 55413470 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2482 K08869 - gmx:100786615 943.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2302 1 48489377 48494074 Pvu8g2482 8 55405564 55413470 PCT