Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2479 ATGTCGCATCTCTCAATGCTCTTTATTTTTGCTTTCATCAACTTCGTAGCCGCAGGGACCGAGTTCGACTTTGGAACTCTCACATTGGAAAGCCTCAAGCTTCTCGGCGACGCTCACTTTAACAACGGCACCGTAAGCCTCACGCGCGACCTTGCCGTTCCCACCTCCAGCGCCGGGAGAGCTCTGTACTCCCGTCCGGTCAGGTTCCGCCTTCCGGGAAACCGCTTTCCGGCCAGCTTCACCACCTTCTTTTCCTTCTCCGTCGCCAACCTCAATCCTTCGTCCATCGGGGGCGGCCTCGCCTTCGTCCTCGCGCCGGACGACGAAACGATCGGCGACGCCGGGGGCTTTCTTGGACTCAGCGCAGCCGCCGCCGCCGCGGATGGGGGCGGCGGAAGCTTTATTGCCGTGGAGTTTGATACGCTTATGGACGTAGAGTTTAAGGACATTAATGGGAACCACGTCGGGCTGGACTTAAACAGCGTCGTTTCGAGCGAGGTTGGTGATTTGGAGAGCTTTGGGGTCGATCTGAAGAGCGGTGACCTAATTAACGCGTGGATTGAGTTCGATGGATCGAGCAAAGGGTTGAGCGTGTGGGTTTCGTATTCCAATTTGAAACCGAAAGATCCCGTTTTGTCGACGAGCCTCGATGTTGATAAGTATTTGAATGATTTTATGTATGTGGGGTTCTCAGGTTCCACGCAGGGTAGCACAGAGGTTCACAGAATAGAGTGGTGGAGTTTTGGTTCGTCTTTTGAAGCTGCGGCGGCGGCTGCGCCGCCGCCTCCACCGGCGGTGAGTTTGCTGAACCCGACGGCGAATGCGGTGAACTCGGCGCCTCCTTCTTTGGCTCCTTCTAATAGTGAAGAGAAAGAGAGCAAAAGCAAATCGTCTTGCCACAATGGGTTGTGTAAGCAGAATTTGGGAGCGGTTGCTGGTGTTGTGACTGCTGGGGCATTTGTTTTGGCTATTTTTGCTGGTGCATTGATTTGGTTTTACTCTAAGAAGGTTAAGCGTGTTAACAAGTTTGATTCGCTTGGTTCCGAGATCATTAAAACGCCGAAGCAGTTTACCTACAAGGAGCTGAAGTCGGCTACGAAGTGTTTCAATGCGAATAGGATCATTGGCCATGGCGCGTTTGGGACTGTGTATAAGGGGGTTTTGCCTGATAATGGGGACACTGTTGCGGTGAAGAGGTGCAGCCATAGTAGTCAGGGGAAGAATGAGTTTTTGTCTGAGTTGTCTATCATTGGGAGTCTGAGGCATCGGAATCTTGTTCGGCTTCAAGGGTGGTGCCATGAAAAAGGGGAGATTCTGCTGGTGTATGACTTGATGCCTAATGGGAGTTTGGACAAGGCTTTGTTCGAGGCTAGGACACCGCTTCCCTGGTCCCACCGGCGCAAGATTTTGCTGGGCGTGGCCTCGGCCTTGGCCTACTTGCATCAAGAGTGTGAGAATCAGGTGATTCACAGGGACATCAAGACTAGTAATATAATGCTGGATGAAGGGTTCAATGCCAGGTTGGGAGATTTTGGTTTGGCGAGGCAAACTGAGCATGATAAGTCGCCGGATGCCACCGTGGCTGCTGGGACAATGGGGTACCTGGCACCCGAGTATCTCCTCACTGGAAAGGCTACAGAGAAAACTGATGTGTTTAGTTATGGTGCAGTGGTTCTTGAGGTGGCCAGTGGGAGAAGACCGATAGAGAAGGATGGCAATGGGGGTGCTAAAGGTGGCATTAGCTGCAATTTGGTAGAATGGGTATGGAGTTTGCACCGGGAAGGAAGGTTGCTATTGGCGGCTGATGCAAGGCTTGAGGGGGAGTTTGATGAGGCAGAGATGAGGAGGGTACTCTTGGTTGGGCTAGCTTGCTCTCACCCTGATCCATTGGCTCGACCTACTATGAGGGGTGTGGTTCAGATGCTGGTGGGGGAAGCTGAAGTGCCTATTGTCCCAAGAACCAAGCCCTCCACTGGTTTCAGTACTTCCCACTCTTACTTACTAATGAGCTTGCAAGATAGTGTATCTGACTGTGATGGCATAATCACCATCTCTACATCCACATCAGAGAACAGCTTCGATCTTGGAGATATAGTCTGA 2100 0.52 MSHLSMLFIFAFINFVAAGTEFDFGTLTLESLKLLGDAHFNNGTVSLTRDLAVPTSSAGRALYSRPVRFRLPGNRFPASFTTFFSFSVANLNPSSIGGGLAFVLAPDDETIGDAGGFLGLSAAAAAADGGGGSFIAVEFDTLMDVEFKDINGNHVGLDLNSVVSSEVGDLESFGVDLKSGDLINAWIEFDGSSKGLSVWVSYSNLKPKDPVLSTSLDVDKYLNDFMYVGFSGSTQGSTEVHRIEWWSFGSSFEAAAAAAPPPPPAVSLLNPTANAVNSAPPSLAPSNSEEKESKSKSSCHNGLCKQNLGAVAGVVTAGAFVLAIFAGALIWFYSKKVKRVNKFDSLGSEIIKTPKQFTYKELKSATKCFNANRIIGHGAFGTVYKGVLPDNGDTVAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWSHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIEKDGNGGAKGGISCNLVEWVWSLHREGRLLLAADARLEGEFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQMLVGEAEVPIVPRTKPSTGFSTSHSYLLMSLQDSVSDCDGIITISTSTSENSFDLGDIV* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2479 699 SUPERFAMILY Protein kinase-like (PK-like) 351 668 IPR011009 -
Pvu8g2479 699 Pfam Legume lectin domain 21 257 IPR001220 GO:0030246
Pvu8g2479 699 ProSiteProfiles Protein kinase domain profile. 369 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2479 699 Gene3D Phosphorylase Kinase; domain 1 332 444 - -
Pvu8g2479 699 Pfam Protein kinase domain 370 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2479 699 Gene3D - 18 260 - -
Pvu8g2479 699 Gene3D Transferase(Phosphotransferase) domain 1 445 648 - -
Pvu8g2479 699 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 18 691 - -
Pvu8g2479 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Pvu8g2479 699 ProSitePatterns Protein kinases ATP-binding region signature. 375 398 IPR017441 GO:0005524
Pvu8g2479 699 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 258 IPR013320 -
Pvu8g2479 699 CDD STKc_IRAK 375 642 - -
Pvu8g2479 699 MobiDBLite consensus disorder prediction 277 296 - -
Pvu8g2479 699 ProSitePatterns Legume lectins beta-chain signature. 135 141 IPR019825 -
Pvu8g2479 699 PANTHER - 18 691 - -
Pvu8g2479 699 CDD lectin_legume_LecRK_Arcelin_ConA 20 252 IPR001220 GO:0030246
Pvu8g2479 699 SMART serkin_6 369 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2479 Pvu-Chr8 55391513 55394391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2479 1 681 Receptor kinase-like Gene Family AT3G53380 67.723 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu8g2479 Pkinase 2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2479 - - gmx:100793157 1191.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0919 6 20646236 20648272 Pvu8g2479 8 55391513 55394391 PCT