Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2472 ATGACCTTGGAGGGGATTTTCATTGAGCCTACCTCAACAACTGCTCCTGATCTTTCTCTTCACATAAGCCCTCCAAGCATCTCATCTTCCTTGATTTCCAATTATGAACCCCAAGCTAGTTTCCCTTCAAGGACTGTGTCTCAAGCCCACACTGAACTCTCTCTTGGAAGGAATTTCACTTCACCAAGACCAACACCAAGACCAACTCCAACACCTCACAGCCCTTATTATCCAGGGCAAGCCCATTTCCATCATCTTCTCCACAGCAGCAGCGCCAGTACTAGTAGTAATACTGCAACAAGTGTTGCTGCAAGTACCAACACTCCCTTGAACCACATAAACTATGGAGTTTCATTGCTTGATGTGTCATCATCGGACGGCTTGAGGCCAATCAAGGGGATTCCGGTGTATCACAACCGCTCATTCCCCTTTGTGGCCATGGACCATGCTAGAGACAACAAGGATCCCCATAACAAGATGTGCTTATATCATCACGTGCCTTCTTACCCGGCTCTCTCTTCTTCATCTTCCTCTCTGTGCTCCACAACCGCTTCTTCTTCTTCACCTTCACCTTACTTTGTGGATCCCATGTCCTTCTTGAACAACGGTTCCACCTTGGCGTGTAGGGCAGCCACTGCCACAAGGTTTAATGGCTTTTCTGGCGATGCTTTCAAATCTCATCCATTGCACCAATATGGGGTAGGCTCTTCAGAAGCCTCTTCAGGGTTCATGAGATCAAGGTTTTTGTCTAAGCTTCCCAACAAGAGGAGCATGAGAGCACCCAGAATGAGGTGGACAAGCACCCTCCATGCTCGATTTGTCCATGCGGTCGAACTTCTTGGAGGCCATGAAAGAGCTACTCCAAAATCAGTTCTTGAGCTCATGGATGTGAAGGATCTAACATTAGCTCATGTCAAAAGCCACTTGCAGATGTATCGAACTGTTAAGACCACTGACAAACCTGCAGCATCTTCAGGCCATTCAGATGGGTCTGGAGAGGATGACTTGTCTCCTATTGGCAGCACCGCCGATCGGAGCAGTCTCCGACAATTTCCCAACCACAGAGGGCGGCCGGAATGGGTGGCGCAACAAGACATGGACTACTCTTCCACCACCACTCTTTGGAGTAATTCTTCAAG 1139 0.4846 MTLEGIFIEPTSTTAPDLSLHISPPSISSSLISNYEPQASFPSRTVSQAHTELSLGRNFTSPRPTPRPTPTPHSPYYPGQAHFHHLLHSSSASTSSNTATSVAASTNTPLNHINYGVSLLDVSSSDGLRPIKGIPVYHNRSFPFVAMDHARDNKDPHNKMCLYHHVPSYPALSSSSSSLCSTTASSSSPSPYFVDPMSFLNNGSTLACRAATATRFNGFSGDAFKSHPLHQYGVGSSEASSGFMRSRFLSKLPNKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGEDDLSPIGSTADRSSLRQFPNHRGRPEWVAQQDMDYSSTTTLWSNSS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2472 379 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 379 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pvu8g2472 379 SUPERFAMILY Homeodomain-like 258 314 IPR009057 -
Pvu8g2472 379 PANTHER TRANSCRIPTION REPRESSOR KAN1 1 379 - -
Pvu8g2472 379 MobiDBLite consensus disorder prediction 318 379 - -
Pvu8g2472 379 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 261 314 IPR006447 GO:0003677
Pvu8g2472 379 MobiDBLite consensus disorder prediction 45 80 - -
Pvu8g2472 379 Gene3D - 260 317 - -
Pvu8g2472 379 MobiDBLite consensus disorder prediction 45 62 - -
Pvu8g2472 379 MobiDBLite consensus disorder prediction 364 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2472 Pvu-Chr8 55324221 55326586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2472 1 379 G2-like Transcription Factor Family AT5G16560 41.032 2.86e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu8g2472 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2472 - - gmx:100812229 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2472 8 55324221 55326586 Pvu8g2472 8 55324221 55326586 ECH
Pvu1g2356 1 48935004 48941647 Pvu8g2472 8 55324221 55326586 PCT