Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2463 ATGACGGAGAGCAAGAATGTGAAGGCGGCGGCGACGGAAGAGAGAGAGGAAGGGAAGCAGACGACGTCGTCTTCGACTCCACTTTCTCATTCGCGGTCGTTGTCTTTGTCGTCGTCGTCGTCTTCCGATGAGAGAGAGTACGAGGTGCAGGACCTGCGGGACCGGTTGAAATCTTCGAGAGGGAGCCGATTCAATCTGATACAGAATGAGTTGGGACTCAACTCAAGATGGAGCAAGTTCAGTCGCGAAGCTCTTCTCCATGGAATCCGAGGCTTCTCCAAGGACTTCGTCATTCATCCTGATAACAGGTGGTACCGGGCATGGACAAAATTCATATTGCTATGGGCAGTGTATTCATCCTTCTTCACCCCAATGGAGTTTGGATTTTTCCGTGGCTTGCCTGAGAATCTCTTTATTCTGGACATCATTGGACAAATAGCTTTTCTCGTCGATATTTTCTTGCAATTCTTTGTTGCTTACAGAGACAGCCAGACCTATCGTATGATCTACAAGCGAACACCTATAGCTCTGCGGTATCTAAAATCTGACTTCATGCTTGATCTTCTTGGGTGTATGCCATGGGACGTCATCTTCAAGGCTAGTGGACGAAAAGAGGAGGTGAGGTACCTTTTGTGGATCAGATTATACAGGGTGCGGAAAGTCACAGATTTTTTCCACAAGTTGGAGAAGGACATACGTGTCAATTACATTACTACCCGGATTGTGAAACTGATTGTGGTCGAACTCTACTGCACCCATACAGCAGCCTGCATTTTCTACTTTTTGGCTACCACTCTACCAGACTCACAAGAAGGGTACACATGGATAGGAAGTTTAAAATTGGGTGACTATAGTTATTCACATTTCAGAGAAATTGATCTTTGGAAGCGCTACACAACATCTCTGTATTTCGCTATTGTTACTATGGCAACAGTCGGCTATGGAGACATACATGCAGTTAATTTGAGGGAGATGATATTCGTAATGGTATACGTTTCATTTGATATGATTCTTGGTGCCTATTTGATCGGTAACATGACAGCTTTGATAGTCAAGGGGTCAAAAACTGAGAAGTTTAGAGATAAGATGACAGACCTTCTGAAATATATGAACAGAAATAAGCTTGGAAGGGATATCCGTGAACAAATTAAAGGCCATGTGCGATTACAGTATGAGAGTAGCTACACTGAGGCTGCTGTCATTCAGGATATCCCTATTTCTATTCGAGCTAAGATATCCCAAACATTATACTTGCCATACATAGAAAATGTTTCTCTTTTCAAGGGATGCTCTTCAGAATTCATCAACCAGATTGTTATTAGGATCCATGAGGAGTTCTTTCTTCCTGGGGAAGTTATAATGGATCAAGGAAATGCTGTAGATCAACTATATTTTGTCTGTCATGGAGTGCTGGAAGAAGTGGGCATAGCTGAAGATGGGTCTGAAGAAACTGTTTCACTTCTGCAGCGTCACAGTTCATTTGGAGAAATATCAATTCTTTGCAACATTCCTCAGCCATATACTGTTCGCGTTTCTGAACTGAGTAGACTCCTGCGACTTGATAAACAATCATTTACAAATATCCTAGACGTATACTTTTATGATGGAAGGAAAGTATTAAACAACCTTCTAGAGGGAAAAGAGTCTTTTCGAGGTAAGCAGTTGAAGTCAGACATCACATTTCACATTGGAAAACAAGAAGCTGAGCTTGCTTTGAAGGTCAATAGTGCAGCTTTTCATGGGGATCTGCATCAGCTTAAAGGTTTAATTCGAGCTGGAGCTGATCCCAACAAGACAGATTATGATGGAAGATCACCTATACATCTTGCAGCATCTAGAGGACACGAAGATATAACACTTTTCCTTATTAAAGAACGTGTAGATATCAATATTAAAGATAACTTCGGGAACACACCCTTACTTGAAGCAGTTAAGAATGGAAATGATCGGGTTGCTTCTTTACTTCTTAAAGAAGGGGCCTCCATGAAGATCGAAAATGCTGGTAGTTTTTTGTGTACAGCAGTTGCAAGGGGAGATTCAGATTATCTTAAAAGACTTTTATCCAATGGCATGGATCCTAACTTAAAAGATTATGATTACCGAAGCCCTCTTCACATAGCCGCAGCCGAAGGTTTACACTTCATGGCAAAGTTGCTATTAGAAGCCGGAGCTACTGTTTTTAACAAAGACAGATGGGGAAATACTCCGCTTGATGAAGCCCGGATGTGTGGAAATAAGAATCTGATCAAGTTACTGGAAGAAGCAAAATCTGCTCAACTTTTAGAATTCCCGTATTCCTCCCAAGAATGTACAGATAAAATGCACGCAAAGAAGTGCACAGTCTTCCCTTTCCACCCGTGGGATCCGGAAGATAATAGAAGACATGGAATTGTACTATGGATTCCGCACTCCATCGAAGAGCTAATCAAATCAGCTGCAGAACAAATAAACATTTCTGGCGATTCTTGTATTTTATCAGAAGATGGTGGTAAAATTAATGACGTGGACATGATTAAGGATGGTCAGAAGCTGTACTTAGTCAATGAAACACATTAA 2556 0.4163 MTESKNVKAAATEEREEGKQTTSSSTPLSHSRSLSLSSSSSSDEREYEVQDLRDRLKSSRGSRFNLIQNELGLNSRWSKFSREALLHGIRGFSKDFVIHPDNRWYRAWTKFILLWAVYSSFFTPMEFGFFRGLPENLFILDIIGQIAFLVDIFLQFFVAYRDSQTYRMIYKRTPIALRYLKSDFMLDLLGCMPWDVIFKASGRKEEVRYLLWIRLYRVRKVTDFFHKLEKDIRVNYITTRIVKLIVVELYCTHTAACIFYFLATTLPDSQEGYTWIGSLKLGDYSYSHFREIDLWKRYTTSLYFAIVTMATVGYGDIHAVNLREMIFVMVYVSFDMILGAYLIGNMTALIVKGSKTEKFRDKMTDLLKYMNRNKLGRDIREQIKGHVRLQYESSYTEAAVIQDIPISIRAKISQTLYLPYIENVSLFKGCSSEFINQIVIRIHEEFFLPGEVIMDQGNAVDQLYFVCHGVLEEVGIAEDGSEETVSLLQRHSSFGEISILCNIPQPYTVRVSELSRLLRLDKQSFTNILDVYFYDGRKVLNNLLEGKESFRGKQLKSDITFHIGKQEAELALKVNSAAFHGDLHQLKGLIRAGADPNKTDYDGRSPIHLAASRGHEDITLFLIKERVDINIKDNFGNTPLLEAVKNGNDRVASLLLKEGASMKIENAGSFLCTAVARGDSDYLKRLLSNGMDPNLKDYDYRSPLHIAAAEGLHFMAKLLLEAGATVFNKDRWGNTPLDEARMCGNKNLIKLLEEAKSAQLLEFPYSSQECTDKMHAKKCTVFPFHPWDPEDNRRHGIVLWIPHSIEELIKSAAEQINISGDSCILSEDGGKINDVDMIKDGQKLYLVNETH* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2463 851 Gene3D - 559 667 IPR036770 -
Pvu8g2463 851 SMART cnmp_10 426 544 IPR000595 -
Pvu8g2463 851 MobiDBLite consensus disorder prediction 1 47 - -
Pvu8g2463 851 ProSiteProfiles Ankyrin repeat region circular profile. 635 666 - -
Pvu8g2463 851 PRINTS EAG/ELK/ERG potassium channel family signature 141 151 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu8g2463 851 PRINTS EAG/ELK/ERG potassium channel family signature 250 260 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu8g2463 851 PRINTS EAG/ELK/ERG potassium channel family signature 298 315 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu8g2463 851 PRINTS EAG/ELK/ERG potassium channel family signature 342 351 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu8g2463 851 Pfam Ankyrin repeats (3 copies) 672 753 IPR002110 GO:0005515
Pvu8g2463 851 Pfam Ankyrin repeats (3 copies) 577 665 IPR002110 GO:0005515
Pvu8g2463 851 ProSiteProfiles Ankyrin repeat profile. 699 731 IPR002110 GO:0005515
Pvu8g2463 851 CDD CAP_ED 426 540 IPR000595 -
Pvu8g2463 851 ProSiteProfiles Ankyrin repeat profile. 602 634 IPR002110 GO:0005515
Pvu8g2463 851 Pfam Ion transport protein 106 351 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pvu8g2463 851 ProSiteProfiles Ankyrin repeat profile. 635 667 IPR002110 GO:0005515
Pvu8g2463 851 PANTHER POTASSIUM CHANNEL SKOR-LIKE 40 850 - -
Pvu8g2463 851 SUPERFAMILY Voltage-gated potassium channels 99 351 - -
Pvu8g2463 851 SUPERFAMILY cAMP-binding domain-like 354 543 IPR018490 -
Pvu8g2463 851 ProSiteProfiles cAMP/cGMP binding motif profile. 426 546 IPR000595 -
Pvu8g2463 851 Pfam Cyclic nucleotide-binding domain 446 530 IPR000595 -
Pvu8g2463 851 PRINTS Ankyrin repeat signature 603 618 IPR002110 GO:0005515
Pvu8g2463 851 PRINTS Ankyrin repeat signature 651 665 IPR002110 GO:0005515
Pvu8g2463 851 PANTHER POTASSIUM CHANNEL AKT1 40 850 IPR045319 GO:0005249|GO:0006813
Pvu8g2463 851 Pfam KHA, dimerisation domain of potassium ion channel 777 846 IPR021789 -
Pvu8g2463 851 ProSiteProfiles Ankyrin repeat region circular profile. 602 634 - -
Pvu8g2463 851 ProSiteProfiles Ankyrin repeat region circular profile. 699 731 - -
Pvu8g2463 851 SUPERFAMILY Ankyrin repeat 575 754 IPR036770 -
Pvu8g2463 851 Gene3D Jelly Rolls 410 547 IPR014710 -
Pvu8g2463 851 ProSiteProfiles KHA domain profile. 778 851 IPR021789 -
Pvu8g2463 851 MobiDBLite consensus disorder prediction 21 43 - -
Pvu8g2463 851 ProSiteProfiles Ankyrin repeat profile. 666 698 IPR002110 GO:0005515
Pvu8g2463 851 Gene3D - 668 761 IPR036770 -
Pvu8g2463 851 Gene3D - 108 352 - -
Pvu8g2463 851 SMART ANK_2a 602 631 IPR002110 GO:0005515
Pvu8g2463 851 SMART ANK_2a 567 598 IPR002110 GO:0005515
Pvu8g2463 851 SMART ANK_2a 635 664 IPR002110 GO:0005515
Pvu8g2463 851 SMART ANK_2a 699 728 IPR002110 GO:0005515
Pvu8g2463 851 SMART ANK_2a 666 695 IPR002110 GO:0005515
Pvu8g2463 851 SMART ANK_2a 732 761 IPR002110 GO:0005515
Pvu8g2463 851 Gene3D Helix hairpin bin 353 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2463 Pvu-Chr8 55240250 55250647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2463 645 762 Ion Channels AT5G37500 31.081 3.95e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2463 K21867 - gmx:100814385 1525.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2463 8 55240250 55250647 Pvu8g2463 8 55240250 55250647 ECH