Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2450 ATGAAGTCTGCGCGGGTTGTAGAAGCGATTTTCTTTACTCTCCTAACGTGCTTCTTCGCCATTGCCGATTCGGATCTAGCTTCGGACAGAGCGGGGTTAGTGTCACTCCGAAGCGCGTTGGGGGGACGCACGCTGCTATGGAACACCACCCAAACAACCCCTTGCTCCTGGACCGGCGTAACCTGCACCAACGGCAGAGTAACCTTGCTGCGCCTCCCTGCGATGGGTCTCTCCGGTTCGCTGCCCTCCGGTTTGGGAAACCTCACCGAATTGCAGACGCTCTCCCTTCGGTTCAACGCGCTAACCGGACGAATCCCGGCGGATTTCGTTAACCTCAAAGCGCTGCGGAACCTCTATCTCCAGGGAAACTTCTTCTCCGGCGAAGTTCCTGATGCGGTGTTCGCTTTGCAGAACCTCGTGAGGTTGAATTTAGGTAGCAACAATTTCAGCGGCGAGATTTCGCCCAAGTTCAATGGTCTCACTCGTTTGTCCACTCTTTATCTCGAACGCAACAATTTCACTGGTTCAATCCCTGACCTTAGTGTTCCGCCTCTGGATCAGTTCAACGTCTCGTATAATTCCCTTAACGGTTCCATTCCGAACCGGTTTTCGCGTGTGGACCAGACCGCTTTTCTCGGAAACTCGCTCTGCGGGAAGCCCTTACAACTTTGCCCCGGAACCGAGGAGAAGAGAAAGAGTAAATTATCCGGTGGTGCCATTGCGGGTATCGTGATTGGTTCCGTGTTTGGTTTGCTGTTGATTCTGCTGCTTTTGTTCTTTTTGTGTAGAAAAAGGAGTGGGAAAAACGATGAAAGTGTGACAACTGGGAAGCGTGATGTGGAAGGTGAAGTGTCTCGTGACAAGAGTGTTGAGAGTGGGAATTCAGGTTCCGCAGTGGCAGGTTCGGTGGAGAAGAGTGAGGTTCAAAGTAGTGGTGGTGGAGATAAGAGTTTGGTGTTTTTTGGGAATGTGAATAGAGTGTTTAGTTTGGACGAGTTGTTGAGGGCTTCTGCGGAAGTGTTGGGGAAAGGAACGTTTGGAACGACTTATAAGGCGACTTTGGAAATGGGGGTGAGTGTGGCGGTGAAGAGGTTGAAGGATGTTACTGCCACAGAGAGGGAATTCAGGGAGAAGATTGAGCAAGTGGGGAAGATGGTTCATCACAACTTGGTCCCACTTAGGGGTTATTTCTTTAGCAGGGATGAGAAGCTTGTTGTCTATGATTACATGCCTATGGGAAGCTTATCTGCTCTCTTACATGCAAATGGTGGGGTGGGGAGGACTCCACTGAATTGGGAAACAAGGTCTGCCATTGCCCTTGGTGCTGCTCGTGGGATTGCCTACATTCATTCGCATGGCCCAACATCCTCTCATGGAAACATCAAGTCATCGAATATTCTTCTCACCAAATCTTTTGAAGCTCGTGTCTCTGACTTTGGCCTTGCTTACCTTGCCCTTCCAACCTCTACTCCAAACCGTGTTTCTGGTTACAGAGCACCAGAGATCACTGATGCGCGCAAAGTATCCCAAAAAGCTGATGTCTATAGCTTTGGTATCATGCTTTTGGAGCTGCTTACAGGGAAGGCTCCTGCTCATTCTTCACTGAATGACGAAGGGGTGGACCTCCCAAGATGGGTTCAATCTGTGGTTCAAGGTGAGTGGAATACTGATGTGTTTGACATGGAGCTTCTAAGGTACCAGAGTGTTGAGGAGGAAATGGTGAAGCTCTTGCAGCTTGCCCTTGAATGCACTGCCCAATATCCTGATAAAAGACCTTCAATGGATGTGGTGGAAAGCAAGATTGAGGAAATTTGTCATCCTAGTTTAGAGAAAGAGGAAGAGAAGAACAATGATTTTAAAGATGCTGATAATGGATTGTCCCAACAATACTACTCTGTTGACTCGGGTGTGTCACAAGCTTCAATACAGAATTGA 1935 0.4889 MKSARVVEAIFFTLLTCFFAIADSDLASDRAGLVSLRSALGGRTLLWNTTQTTPCSWTGVTCTNGRVTLLRLPAMGLSGSLPSGLGNLTELQTLSLRFNALTGRIPADFVNLKALRNLYLQGNFFSGEVPDAVFALQNLVRLNLGSNNFSGEISPKFNGLTRLSTLYLERNNFTGSIPDLSVPPLDQFNVSYNSLNGSIPNRFSRVDQTAFLGNSLCGKPLQLCPGTEEKRKSKLSGGAIAGIVIGSVFGLLLILLLLFFLCRKRSGKNDESVTTGKRDVEGEVSRDKSVESGNSGSAVAGSVEKSEVQSSGGGDKSLVFFGNVNRVFSLDELLRASAEVLGKGTFGTTYKATLEMGVSVAVKRLKDVTATEREFREKIEQVGKMVHHNLVPLRGYFFSRDEKLVVYDYMPMGSLSALLHANGGVGRTPLNWETRSAIALGAARGIAYIHSHGPTSSHGNIKSSNILLTKSFEARVSDFGLAYLALPTSTPNRVSGYRAPEITDARKVSQKADVYSFGIMLLELLTGKAPAHSSLNDEGVDLPRWVQSVVQGEWNTDVFDMELLRYQSVEEEMVKLLQLALECTAQYPDKRPSMDVVESKIEEICHPSLEKEEEKNNDFKDADNGLSQQYYSVDSGVSQASIQN* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2450 644 MobiDBLite consensus disorder prediction 268 288 - -
Pvu8g2450 644 MobiDBLite consensus disorder prediction 268 312 - -
Pvu8g2450 644 Pfam Protein kinase domain 338 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2450 644 Gene3D Transferase(Phosphotransferase) domain 1 410 630 - -
Pvu8g2450 644 Gene3D Ribonuclease Inhibitor 135 238 IPR032675 -
Pvu8g2450 644 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Pvu8g2450 644 Gene3D Ribonuclease Inhibitor 33 134 IPR032675 -
Pvu8g2450 644 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Pvu8g2450 644 SUPERFAMILY Protein kinase-like (PK-like) 339 598 IPR011009 -
Pvu8g2450 644 CDD STKc_IRAK 341 604 - -
Pvu8g2450 644 SUPERFAMILY L domain-like 46 208 - -
Pvu8g2450 644 ProSiteProfiles Protein kinase domain profile. 335 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2450 644 MobiDBLite consensus disorder prediction 289 312 - -
Pvu8g2450 644 PANTHER INACTIVE RECEPTOR KINASE-RELATED 10 619 - -
Pvu8g2450 644 PANTHER OS05G0588300 PROTEIN 10 619 - -
Pvu8g2450 644 Gene3D Phosphorylase Kinase; domain 1 303 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2450 Pvu-Chr8 55097564 55100906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2450 25 604 Receptor kinase-like Gene Family AT1G48480 58.469 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu8g2450 Pkinase 6.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2450 - - gmx:100801582 1030.39